| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_4384 |
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| Symbol | |
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| ID | 7090171 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011664 |
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| Strand | + |
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| Start bp | 51003 |
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| End bp | 51878 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 643463255 |
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| Product | type-F conjugative transfer system pilin assembly protein TraF |
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| Protein accession | YP_002360267 |
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| Protein GI | 217975597 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02739] type-F conjugative transfer system pilin assembly protein TraF |
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Plasmid Coverage information |
| Num covering plasmid clones | 51 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 53 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGACGT TGTTAAATAA CCGCTTGCAA CATGCCGCCG CAGTGCCTTT TTTTCGGTGG
TCAAGCCGCG CGCCGTTGGC GTGGTTGTCC ACAAAAAAAG GGGATGCGGT GGTCAACAAG
CGCAGCGCGT TAGTGCTCCT TATACTGACA ACGTTTTGCC ACGGCGCAAA CGCCACGGAT
GCACAAGGCT GGCGCTGGTA TAACGAACCG ACTGCCCCCA AGAAGCAAGC GCCTAAAAAG
GCCGAAACGC CAAGCGTCAC ACTCACGCGC ACCCAAACCC TGACGCCCAC CGAGCAGATG
GATTGGTTTC ACAGCTACTA CCAAGACACG CTCAATGACG CGGCGATAAA CAGCCAAGAC
AGCGAGAAAG TGGAAAGGGC CATGCTGCTT AATCAGTACG TCAGCAATAA ATCCTCAGAG
TTTGGCATGA CCTTCAAAAA GGTCCTGCTG GATAACCCTG AGCTGTCTTA CACCAAAGAC
AGACCGACGG AACAAGCGGC AAGAAGTACG TATTTATCAT TAGAGCGCAA CAAGAAGATG
CGCGCAGTAC GCACCCTTGC AGATGCGGGA TGGGGCCTGT TCTTTGTCTA CAAAGGCAGT
GAAGAAATTG ATATTGCGCT GGCGCCCAGC GTGCAGCAGT TCGCAACGCA ACATGGCATT
GAGCTACTTG GCGTCACGCT GGATGGTGTA GCACTGCCAG CCATCGTACA GAACCGCCAA
AACGACCAGC ACATAAACGT CCCGTTTAGT CCCGCACTCG TGTTAGTTAA TCCTGGCACG
GGGGAAATGA AACCGCTCGC TTATGGCTTT ATCTCTCAAG ACGATTTACT TGGCCGCTTC
CTGAACGTGG CCACCGATTT CGCCCCTGAC TTTTAA
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| Protein sequence | MRTLLNNRLQ HAAAVPFFRW SSRAPLAWLS TKKGDAVVNK RSALVLLILT TFCHGANATD
AQGWRWYNEP TAPKKQAPKK AETPSVTLTR TQTLTPTEQM DWFHSYYQDT LNDAAINSQD
SEKVERAMLL NQYVSNKSSE FGMTFKKVLL DNPELSYTKD RPTEQAARST YLSLERNKKM
RAVRTLADAG WGLFFVYKGS EEIDIALAPS VQQFATQHGI ELLGVTLDGV ALPAIVQNRQ
NDQHINVPFS PALVLVNPGT GEMKPLAYGF ISQDDLLGRF LNVATDFAPD F
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