| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_4163 |
|---|
| Symbol | |
|---|
| ID | 7088486 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | + |
|---|
| Start bp | 4943179 |
|---|
| End bp | 4944858 |
|---|
| Gene Length | 1680 bp |
|---|
| Protein Length | 559 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 643463042 |
|---|
| Product | PepSY-associated TM helix domain protein |
|---|
| Protein accession | YP_002360057 |
|---|
| Protein GI | 217975306 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3182] Uncharacterized iron-regulated membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 85 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGATG GATTCCGTAC TCGGATGAGT CTCCTGCACA CTTGGGCAGG ATTGATATTA
AGCGGCTTGC TGTTCGCCAT TTTTTGGACC GGCACGCTGT CAGTATTCGA TAAAGAAATC
GATCGCTGGA TGATGCCACA CACTCGAATC CACATGGATA CTGCAAGGCC ATTATCGGTA
GACCGCGAGA TCATACCTTT ACTGGCAGAG CGAGCTGCGG GGGCAAAAGC TTGGACTATA
GTGCTACCCG CTGAGCGCAG ACCTTTTTTG ACATTGGCTT ATGATTCTGC AAAGTCACAC
ATAGCACAGC GAAATAGTTT CCACCCGATC ACGCTCGAAC CGCTTCCGGC TCCAAACACC
CGAGGAGCGA GTAACTTTAT TTACCCCTTC CATCACAATT TAACCTTACG CCAAAACAAC
ATTGGCGCCC TACTGGTTGG CATTGCGAGC ATGGGTATGC TTTGCCTGTT AATTTCCGGC
ATAGTCATAC ACCGTAGAAT ATTTGCCGAT TTCTTTACCC TTAGGCTGCT TCGTGGCTTT
GGCAGAGCCA ATCTCGATAT TCATAACCTC ACAGGCGTTG TGCTGCTGCC TTTCACTATC
GTCATCACCT TGTCAGGGCT AATGATTGCG CACTTGATCT ATTTCCCCAA GGCGCCCGAT
GCCGTTTTCG CACAGCTCAA CCCACCATCC GTGACGCAGG AACGACCCAA ATCCAAAGTA
AGAGAAGCTT CACGCAAACG TGAGCAAGAT GTTAGCCGTG AAAATGAAGA CGAAATTACC
GATGCCAGAG AAGGCTCACG CAATAGTCCT GCACGGAGCC GTTTTATCGC CGAATCACAG
GGGCGTGTTA GACCACAAGC AATAGGCCAA CCCGCCAATG TTGCCGCAAT TTATCCTATG
ATTGCGGTGA CCGAAAGCGA GCTAGGTCAA GGGGCTGTCT ATATGATTCG GGTTAGCAAT
CCTGGAGATG CAGGTGGTGT CGTCGCACTC AGGCTAAATG GCGATAACAG CGTATCTCAG
AATATTGATA ATAGGAGATT TTCTACCGCC ACTGGAGAGG AACTAGCACA TTTCAACTCA
TCCTCGACGA CCAATGTATT TAACTTTATT GCTGGTATGC ATTACATCAA ATTTAAACAC
TGGCCACTGC GCTGGCTTTA TTTTATCGCA GGGCTGGGTG CTTGCGCGTT AATCGCCACT
GGCCTACTGC ATTGGACTCA GGCACGTAAC CAAAAGCAAG GCAGCACTGG CTTCAATGTG
TCTTTTATGA ATGCACATAA CATCGCTGCG ATCACTGGCA TTATTTCTGC GACCGGGGCT
TTTTTAGTGG TCAATCGCTT GCTCAATAAT AGAGAACAAT TAGCAGGTAT CTCCAGCCGC
GATTTAGAGG TATATGCCTT CTTTGGTGTC TGGTTAGCTT GCTTACTTCA TGCGTTGATC
AGAGTGTTTT TGAACAAACA GCATGGTTAC CGAAAGGCTT GGGCAGAACA ATGCTGGGCG
ATTACTCTGA TTGCTATCGC AGCTGTGGGA CTGAACTGGA TAACCACAGG CGACCATCTG
CTTAAGACCC TATTCACCCA TACCTATTGG CCCGTTGCGA CCCTAGACTT AGTGCTTGTT
ACTAGTGCAG TGATGGCCAT TTACGCAGCG CGGAAACTAT CCGTTATCCG TGAGAGTTAG
|
|---|
| Protein sequence | MKDGFRTRMS LLHTWAGLIL SGLLFAIFWT GTLSVFDKEI DRWMMPHTRI HMDTARPLSV
DREIIPLLAE RAAGAKAWTI VLPAERRPFL TLAYDSAKSH IAQRNSFHPI TLEPLPAPNT
RGASNFIYPF HHNLTLRQNN IGALLVGIAS MGMLCLLISG IVIHRRIFAD FFTLRLLRGF
GRANLDIHNL TGVVLLPFTI VITLSGLMIA HLIYFPKAPD AVFAQLNPPS VTQERPKSKV
REASRKREQD VSRENEDEIT DAREGSRNSP ARSRFIAESQ GRVRPQAIGQ PANVAAIYPM
IAVTESELGQ GAVYMIRVSN PGDAGGVVAL RLNGDNSVSQ NIDNRRFSTA TGEELAHFNS
SSTTNVFNFI AGMHYIKFKH WPLRWLYFIA GLGACALIAT GLLHWTQARN QKQGSTGFNV
SFMNAHNIAA ITGIISATGA FLVVNRLLNN REQLAGISSR DLEVYAFFGV WLACLLHALI
RVFLNKQHGY RKAWAEQCWA ITLIAIAAVG LNWITTGDHL LKTLFTHTYW PVATLDLVLV
TSAVMAIYAA RKLSVIRES
|
|---|
| |