| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_4159 |
|---|
| Symbol | |
|---|
| ID | 7088482 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | + |
|---|
| Start bp | 4938818 |
|---|
| End bp | 4939324 |
|---|
| Gene Length | 507 bp |
|---|
| Protein Length | 168 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 643463038 |
|---|
| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
|---|
| Protein accession | YP_002360053 |
|---|
| Protein GI | 217975302 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
|---|
| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 86 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGTCGG TCAATATTTC TTCTCCTATC AATAACCTAT ATAGAGATAA CCAGTTTTGG
CTACGCGGCT GGCTATACTC ACGCGTGGGT TGTTCAGAAA CAGCGGCCGA CCTAGCCCAA
GATACATTTC TACGTTTGTT AAAAACCGGA AATTTACCGC CCTCAGGCGA ATCGCGGCGT
TTTTTAACTC GCATTGCCAA AGGATTGATG ATTGATGCTT ATCGTCGGCA GAAGATTGAA
GAAGCCTACC TAGAAAGTTT GAGCTTGATG CCAGAAACCT TCATTCCTGG GCCAGAGATC
CATCATGTCA TCATTGAAAC ACTCGCTGAA ATTGCCGTTA TGCTCGATAA CTTGCCGGAT
AATGTGCGCT TGACGCTGTT ACTGCGCCAG ATAGAGGGTT TAAGCTATGC CGATATTGCT
AAGCAACTAT CAGTTTCTGT TTCATCGGTA GAAAAGTATG TTGCGCGAGG CTTAGCGGCC
TGCTGCCTCG CGCTGGAATC CTATTAG
|
|---|
| Protein sequence | MASVNISSPI NNLYRDNQFW LRGWLYSRVG CSETAADLAQ DTFLRLLKTG NLPPSGESRR
FLTRIAKGLM IDAYRRQKIE EAYLESLSLM PETFIPGPEI HHVIIETLAE IAVMLDNLPD
NVRLTLLLRQ IEGLSYADIA KQLSVSVSSV EKYVARGLAA CCLALESY
|
|---|
| |