Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_4075 |
Symbol | |
ID | 7089696 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | - |
Start bp | 4841505 |
End bp | 4842329 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 643462956 |
Product | glutamate racemase |
Protein accession | YP_002359971 |
Protein GI | 217975220 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0796] Glutamate racemase |
TIGRFAM ID | [TIGR00067] glutamate racemase |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.000696712 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGTCGCGAC CTATATTAGT GTTTGATTCA GGGATTGGTG GCCTATCCGT ATTGGCCGAA ATCCGCAAGA GTTTGCCCCA TAGCGATTAT TGTTATCTTT TCGACAATGC TAGGTTGCCC TATGGCGAGT TAGAAGAGCA GGTATTAATT GCTGGCTGTG TCGCATTAGT ATGTGATCTT GTAGCTCGCA CCAATGCAAT GATAGTGGTC GTCGCCTGCA ATACCGCGAG CACTGTTGTG CTACCGGCAT TACGTGCAAA CCTCAGTATT CCTGTTGTGG GCGTTGTACC CGCTATCAAA CCCGCGGCAC AGATGTCTAA GAGTAAACGT ATTGGACTCT TGGCCACACC AGGCACAGTT AAGCGTCATT ATACCCATTC GCTCATCAGT CAATTTGCCG ATGATTGCCA TGTCGAACTC TTTGGTTGTT CTGAATTAGT CATGATGGCG GAGCAGAAAA TAGCGACAGG TGAAATGGAC ATGCACAGAC TGGCAGATTT ACTGGCGCCA GTCGTTGCCG CGCAATTGGA CGTGCTCGTA CTGGGTTGTA CTCACTTCCC GATGATCCAA GCTGAATTAC AACAAGTGCT CGGTGCGGGC GTAACGCTAA TGGATTCTGG CGCTGCGATA GCTAAGCGAG TCGTGACTCT TTTAACGCAA CAGAATTTTA TTGTGGAGCA GCGCAGAGTA ACAAATGAGA GAGAAGCAGT AGGGGAGTCA GCAATGCAGG CGTTCTATAC TAAAGCGGAA ATCAGTGAAG GCTTAACAAC AACATTAATT GATTGTGGCT TTTCAACTAT CGAACGAATC ACCACAACCA ACTAA
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Protein sequence | MSRPILVFDS GIGGLSVLAE IRKSLPHSDY CYLFDNARLP YGELEEQVLI AGCVALVCDL VARTNAMIVV VACNTASTVV LPALRANLSI PVVGVVPAIK PAAQMSKSKR IGLLATPGTV KRHYTHSLIS QFADDCHVEL FGCSELVMMA EQKIATGEMD MHRLADLLAP VVAAQLDVLV LGCTHFPMIQ AELQQVLGAG VTLMDSGAAI AKRVVTLLTQ QNFIVEQRRV TNEREAVGES AMQAFYTKAE ISEGLTTTLI DCGFSTIERI TTTN
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