Gene Sbal223_3968 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_3968 
Symbol 
ID7086183 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp4726039 
End bp4727196 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content39% 
IMG OID643462843 
Productdiguanylate cyclase 
Protein accessionYP_002359864 
Protein GI217975113 
COG category[T] Signal transduction mechanisms 
COG ID[COG2199] FOG: GGDEF domain 
TIGRFAM ID[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTTAT CAGTCCAAAA CATGATAGAA CTCGATTCTC CAACGCTAAT CATCGCACAA 
GCTATTGTTC AATGGCTGCT TGCAATATTA CTGATGGCTG AGAGGGGAAT GGATAAAGGG
ACTAAATACT GGGTTATTGC ACTGTTTATT CACGGGATTG CTAATCTACT GCTGTTTTCT
CGTCCTTATT TACCTCCCGT TGTTGCGGTT ATTTTTTATA ATTTTTGCGT CACTACTGCG
TTTTCATTCA GTTATCTGGC GTTTGCTCGC TTAGTGGGTA AACAAGCGCC GCTTTGGCTC
GTTTTATTTC CCATATTCGT GATGATCCTG ACTATGTCTA TTTATATTGA TGACATAGCC
ATGCGAGTTA TTTTTGCAAG TATTATTACG GGTACTCAAT TGATCTTAAT GGCATTTATT
TTAACGAGAG GTAATTGGTC TGGAAGTGAA AAGCTAAAGG GCTGGTTGAT GTATTCTACT
GGCTTATTCG GGGTAGGCTT TATCGTAAGA GCCTTATTTT GTTATGTAAA ACCAGAATTA
TTTATTCATT TAGTCGCCAA AAGTTCTTTT CAGAGTGGTT TAGTGATTGC TGGAATGATT
TATATCATTT TCAGCACGGT TGTCATTCTG TTAGTTAGAT TGGATCGATT AAACAAAGAG
TTATCCACAT TAGCTTCGCA GGATAGTTTG ACGGGTTTAT TTAACCGAAG GGCTTTTATG
CATAATGCGA CGAGTATCAT CGCCAGTGAA AACTTTCCCG TTAGTGTGCT TATGTTAGAT
CTTGATAATT TTAAGAAAAT TAATGACGTA CACGGACATA ATGTCGGCGA TACTGTGCTT
AAGCTTTGTG CTGATGCTTT GCAAGATGGA CTAAAGCAAT ATGGCATTAT TGGCCGTTTC
GGTGGCGAAG AGTTCGCCGC CATTTTACCC AGAGCAGATA GCGAACAAGC ATTAGTTGTA
TCCGAAAAAC TTCGATTAGC TATTGAAACA ATTAATGTAA ATCCAGATAT ACGGTTATCA
ATTAGTATTG GTGTGGCGAC GTCCAGTAGT GTTTCGAGTA TTGAGCCTTT GCTTATTCGG
GCCGATAAGG CTTTGTATGA GGCTAAATCT AAAGGTCGCA ATCAGGTAAT TCATGCAGAT
CTGTTAGCAC TTAATTAG
 
Protein sequence
MNLSVQNMIE LDSPTLIIAQ AIVQWLLAIL LMAERGMDKG TKYWVIALFI HGIANLLLFS 
RPYLPPVVAV IFYNFCVTTA FSFSYLAFAR LVGKQAPLWL VLFPIFVMIL TMSIYIDDIA
MRVIFASIIT GTQLILMAFI LTRGNWSGSE KLKGWLMYST GLFGVGFIVR ALFCYVKPEL
FIHLVAKSSF QSGLVIAGMI YIIFSTVVIL LVRLDRLNKE LSTLASQDSL TGLFNRRAFM
HNATSIIASE NFPVSVLMLD LDNFKKINDV HGHNVGDTVL KLCADALQDG LKQYGIIGRF
GGEEFAAILP RADSEQALVV SEKLRLAIET INVNPDIRLS ISIGVATSSS VSSIEPLLIR
ADKALYEAKS KGRNQVIHAD LLALN