| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_3912 |
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| Symbol | |
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| ID | 7086675 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011663 |
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| Strand | + |
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| Start bp | 4662612 |
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| End bp | 4665260 |
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| Gene Length | 2649 bp |
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| Protein Length | 882 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 643462789 |
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| Product | diguanylate cyclase/phosphodiesterase with GAF sensor |
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| Protein accession | YP_002359810 |
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| Protein GI | 217975059 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTAAGG ATGAAGATGA AACTGGCCAG CCTCGTATAA ATGAAGCTGA ACGCTTACGC
AAAAAAATTA TTCGCTTAAA ACAATTAGCG CATAAGTATA AGCATGCTGA GATCATTCAA
AACGCATTAC TCGAAATTTC CAATATTGCG ACCCATGCTT CTTCACTCGA AGAATTCTAT
GTCGGCGTGC ATAGCCACCT AAAACAACTC ATTCCCGCTG ATAATTTTTT TATTTCAACC
CTCGATGTCA GCACTGGCGA GCTTGCTATC CCTTTTTTCG CCGATGAGAA AGATGCGCAT
CCTGCGGAGC TTTATCCTGA ACAATCCTTA TCAACATTAC TACAGCAGGG ATTAACGGGC
TACGTTCTCA GAACTGGTAA GGCTTTGTTA TGTGATGATG ACAAAGTCAA TGAACTGATT
GCCGCAGAGG AAATCGTTAA CTTAGGTTCT CCCTGCCATT TATGGCTTGG CGTGCCCATC
AAACACGATG ACATAGTGAC CGGCGTGTTA GTAGTGCAAA CCTACGACAC AAATGTCAGC
TATGGTGAAA TCGAACTCGA GTTGATGACC TTCATTTGCC ACCACATTTC TGGGGTAATG
GAACGGCTCA AACATCAAGA ACAATTAGAA CAAGCCATTC AGCAAAGAAC CAGAGAACTC
AGCCAAGCCT ACGACAAATT AAAACTAGAA GTCTATGAAA GACGCAGAGC TGAGCGCTTA
CAAAAATCAC TGTTCGAAAT TGCTGAACTA GCCAGTTCCA GTGCCGACAA CCCAGACTTT
TATGCCCAAT TACATAATGT CATTCGACAC CTCATTCCCG CCAACAATTG CTATATCGCG
CTTTTGGATG ACACAGAAAC TCATCTCACG TTCCCCTTTT ATGTCTCGCA ATTAGCCAAT
AAGCATCCAG GAACTCGGCC GCTACAGGAT GGTTTAACCG AATATGTGCT CAAACATAAG
CGCCCACTAC TGTTAGATCA AAATAGTATC AATGCGTTAA TTGCCTCTGG CGAACTGTAT
TCCCAAGCGC CAGCGTTAAA CCACACTCAA ACTATGCATC AATGGATTGG CATCCCCCTC
TTTATCCATG ATCAAGTACG TGGTGCCTTG ACGATTTACA GTTTTAGCAT GACGCAAAAT
TACCAAGTCA AAGACTTAGA ATTACTGACA TTTGTCTCGC AACACATTGG TTCTGCTATC
GAGAAGAAAC TGTCCGCAGA GTCCTTGCAA CGCAGTTATG AAGAGCTAGA AGAAAAAGTC
ATCGATCGCA CTAAAGCGTT AGCCGAACTC AATCAAAACC TTGAGAAAGA AATTCAACAA
CGCCGCAGTA TGGAAGCTAA GTTAGTTCAC GACGCTAAGC ATGATGCACT CACAGGCCTG
CCTAACCGCG CTATGTTTAT GGAACGCTTA TCTCAAGCCA TTAAGCACGT CCGTCGTCAT
AGCTTAGAAC AGTTTGCCCT GCTCTTTATC GATCTCGACC GCTTCAAACA GATTAACGAC
ACTATGGGGC ACTTAGAAGG CGATAAATTC TTAATTGAGA CTGCAAGCCG CCTCAAGTCC
TGCATTCGTG ATAACGATAC ATTAGCGCGT CTGGGTGGCG ATGAGTTCGT CATTCTGCTC
GATAGTATTA ACAACATCAA CGACGCAAGA GACGTATCAG AAAGAGTGAT CCAAAAAATA
TCCCAGCCCT ATCGACTCGG CACGATGGAA TTTAACTCTG GCGCCAGTAT CGGTATCACC
ATCAGTGGTA AGCATAAAGT CGATACCAGT GAATCTATGT TGCGCAACGC GGATACAGCC
ATGTATCAAG CGAAAGCCAA CGGTAAGGGC TGCTATGTTA TTTTTGATGA TAACGCCCAA
CATCAAGCTA TACAGGATGT CGAGTTAGAA ACAGAATTTA GACAGGCATT ACACCATGCC
GAAATCGAAC TCAGTTATTT ACCTGTCGTC GATTTTAACA CTGGTCAAGT ACATGCATTA
GAAAGTCGCC TGTTTTGGCA GCACCCACTA CGTGGACTTT TACAACAGGA ACAACTCAGT
GCACTTGCTG AACAATCCCA TCTTACCGTT GAACTCGATA AATATACGAT CAGCATCATA
GATCGCACTT ATGCTGAACT GCTCAAGCAA CATGATGAAT CTATTGAATT ACATGTGATG
CTTTCGAGCC AACATCTCAA GCATAAGCAC GTACTGCGCA GTTTGAAAAA CACCCTCAAG
CAGACCCAGT TAAACCTGAG CCATTTGTGG TTATTCTTTA ATGAAAAAGC GCTAGTGCAG
GAGACTGAGA ATCATATCAA TGGCTTTGAA TTGTTGCAGA AACTCGGGGT AAAACTCGGT
ATCAGTCATT ACGGTAGCGG CTATAGTGCA TTAAATAGCT TATTGTTTTT GCCGATTAAA
GGCTTAAAGC TCGACGCCAA TCTCACTAAA CAGATACACG CTGAACAGCA GCTTAAATTA
ATGTCCGCTT ATCAAAAAAC GGCATCAACC TTAGAACTGC AAACCTTTGT CGATGGTATT
GATAGCCCTG AACAAAAACG TATCTTCAGT GAACTGGGTT ATCAGCTGGG TCAGGGGGCT
GCTTTAGCCG ACACTTTTAC CTTAAGCGAC ACCCAACCAC AGATCTGTGT TCAGCTCGAA
TATGCCTAG
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| Protein sequence | MFKDEDETGQ PRINEAERLR KKIIRLKQLA HKYKHAEIIQ NALLEISNIA THASSLEEFY
VGVHSHLKQL IPADNFFIST LDVSTGELAI PFFADEKDAH PAELYPEQSL STLLQQGLTG
YVLRTGKALL CDDDKVNELI AAEEIVNLGS PCHLWLGVPI KHDDIVTGVL VVQTYDTNVS
YGEIELELMT FICHHISGVM ERLKHQEQLE QAIQQRTREL SQAYDKLKLE VYERRRAERL
QKSLFEIAEL ASSSADNPDF YAQLHNVIRH LIPANNCYIA LLDDTETHLT FPFYVSQLAN
KHPGTRPLQD GLTEYVLKHK RPLLLDQNSI NALIASGELY SQAPALNHTQ TMHQWIGIPL
FIHDQVRGAL TIYSFSMTQN YQVKDLELLT FVSQHIGSAI EKKLSAESLQ RSYEELEEKV
IDRTKALAEL NQNLEKEIQQ RRSMEAKLVH DAKHDALTGL PNRAMFMERL SQAIKHVRRH
SLEQFALLFI DLDRFKQIND TMGHLEGDKF LIETASRLKS CIRDNDTLAR LGGDEFVILL
DSINNINDAR DVSERVIQKI SQPYRLGTME FNSGASIGIT ISGKHKVDTS ESMLRNADTA
MYQAKANGKG CYVIFDDNAQ HQAIQDVELE TEFRQALHHA EIELSYLPVV DFNTGQVHAL
ESRLFWQHPL RGLLQQEQLS ALAEQSHLTV ELDKYTISII DRTYAELLKQ HDESIELHVM
LSSQHLKHKH VLRSLKNTLK QTQLNLSHLW LFFNEKALVQ ETENHINGFE LLQKLGVKLG
ISHYGSGYSA LNSLLFLPIK GLKLDANLTK QIHAEQQLKL MSAYQKTAST LELQTFVDGI
DSPEQKRIFS ELGYQLGQGA ALADTFTLSD TQPQICVQLE YA
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