Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_3911 |
Symbol | |
ID | 7086674 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | + |
Start bp | 4659386 |
End bp | 4661305 |
Gene Length | 1920 bp |
Protein Length | 639 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 643462788 |
Product | diguanylate cyclase/phosphodiesterase with extracellular sensor |
Protein accession | YP_002359809 |
Protein GI | 217975058 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2200] FOG: EAL domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACACTGT TTAGACAGAT TTATTCGCTG CTTTTTAGCC TATTTTTGCT CGTAGTTGCA AGCCTTGGCT ATGTGCAATT TACTGAGACT CAAAGCTTTT TAACCAAGCA AATGGAGTCA GATCTAAACA ATGCCAGCAC TTCACTTGGT CTAATGCTTA CTCCAGCACT TCAAGCTGGC GATACCGCAG CGGCAGAAAC CTTAGTGAAT GTCATCTTTG AAGGTGGCTA TTATCAAAAT GTAAAGCTGA CATGGATGGT GGATGGTAAG CAACAAGAGT GGAATAACCC TTTAAGAATT GAAGATGTAC CTCAATGGTT TATCAATTTA AATCTATTTA AAACCATCAA AAAACAAAGC ACTATCACTT CTGGCTGGTT GCAACTCGCG CAACTTGAGA TCACCGCTCA TCCTGGGTTT GGTTACCATG AGCTGTGGCG AATCATGTCC AATACGATCA TTGCCTTCTC TCTACTTTTC CTCGTCGCCA TTTTTACCGC AAGAATTGGT TTAACGTGGA TATTGAAACC TCTACACACT TTGTCGGAAC ACGCGAAAAG TATTGCGGCA CGCCAATTTG GCCCAGACAT GGCATTACCT AAGACCACTG AATTGAAAGA CTTAGTGACC GCATTTAACA GTATGTCGGC GCAGTTGAAG CAAGTGTTTC ATTCCCTCGA CGAAGAAGTC GGCGCGTTAC GTAAGAAGAA TCTTGTCGAT CCTGCGTCAG GCCTGCCTAA CCGCCAATAT GTGGTTAGCC GTTTAAATGG TTGGTTGAGT GAACCTAGCA GCGGCGCGTT ATTTCTCGCT AAACTCGACT GGCTCGAAGA AGTGCACAGC AAATATGGCT ACCAAGTTCG AGATGAAACC ATACGGATCT TGGCAGAAAA GTTTCAGCTG CAGTTAAACG AAATAACACC GTCTGTTATA GGCCGCATTG CCGCCTATGA ATTTGCATTT TTAGTGACTG ATGTTGAACA CGATCAAATC AGCAAATATT TACAAACGCT TATCCGCACC ATCAACCAAG AAATGTCGAA GGCGGGCTGT AAGCCTAATG AAGACTTTGC TATTGGTATT GCGGAGCGTA TTGGGCAAAT GAATGTGTCG GATATTTTGG CCCAAGCCGA CAACGCCCTT CAAAAAGCGT TACAAGAGAA TAAAACATTC CATTGGTTTG AAACCACAGA GCAGCAACTA TTCACCCGTG AACAGTGGCG GGATAACCTT AGCCATGCCA TCAGTAATAA GAAGTTTAAG TTTAGATGGC AGCCTATCCA GTTTTGCGAT GGGGATGGTA TAGCGCAGCG GGAATTATAT TGCCAATTAG AGCTAGGCGA TCAACTCGCC CATGCAGGGC AATTTATGCC TTATATCGAG CTCTTATCTC TCGGTGCCTT GCTCGATAAA TGCTTGATCG AAACCGTCTA CGAGCAAAAA CTACTAGAGC GTAGCTATGA ACCGCTCGCG ATTAACTTAA CCCACCAAAG TATTAACGAC CCTCACTTCC ATGAGTGGCT CAATCACTTC TTACGTAATG CCGCATTTAT TGAGCGGATC TGCTTCGAAA TCCCTGAGGC AGGCGTTTAT AGCGATCTTA AGTCGTGTCA GCACTTATGT AACATTATTC GAGATAATGG CGCTAAGTTC GGCATTGATC ACTTTGGCCG TCAGTTTGGC TCTATGTCTT ATCTACAGGA ATTAAGACCG AGTTATGTGA AACTCGATCA ATCCTTCGCC TACTATGATG AGACACACCA TAATAGTGAG CTCTGCCGCG CGCTAATCAA CGTAGCGAAA GGATTAGATA TTCAAGTCAT AGTGACGGGT ATTCAAGAAA AAGCTCAGCT AGAGCGCTTT AACGAGCTTA GAACTGATGC CTATCAGGGC TTTATCGCCC CTCCGGTGAG TCTTGATTAA
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Protein sequence | MTLFRQIYSL LFSLFLLVVA SLGYVQFTET QSFLTKQMES DLNNASTSLG LMLTPALQAG DTAAAETLVN VIFEGGYYQN VKLTWMVDGK QQEWNNPLRI EDVPQWFINL NLFKTIKKQS TITSGWLQLA QLEITAHPGF GYHELWRIMS NTIIAFSLLF LVAIFTARIG LTWILKPLHT LSEHAKSIAA RQFGPDMALP KTTELKDLVT AFNSMSAQLK QVFHSLDEEV GALRKKNLVD PASGLPNRQY VVSRLNGWLS EPSSGALFLA KLDWLEEVHS KYGYQVRDET IRILAEKFQL QLNEITPSVI GRIAAYEFAF LVTDVEHDQI SKYLQTLIRT INQEMSKAGC KPNEDFAIGI AERIGQMNVS DILAQADNAL QKALQENKTF HWFETTEQQL FTREQWRDNL SHAISNKKFK FRWQPIQFCD GDGIAQRELY CQLELGDQLA HAGQFMPYIE LLSLGALLDK CLIETVYEQK LLERSYEPLA INLTHQSIND PHFHEWLNHF LRNAAFIERI CFEIPEAGVY SDLKSCQHLC NIIRDNGAKF GIDHFGRQFG SMSYLQELRP SYVKLDQSFA YYDETHHNSE LCRALINVAK GLDIQVIVTG IQEKAQLERF NELRTDAYQG FIAPPVSLD
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