Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_3901 |
Symbol | hemC |
ID | 7086664 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | + |
Start bp | 4628093 |
End bp | 4629025 |
Gene Length | 933 bp |
Protein Length | 310 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 643462778 |
Product | porphobilinogen deaminase |
Protein accession | YP_002359799 |
Protein GI | 217975048 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0181] Porphobilinogen deaminase |
TIGRFAM ID | [TIGR00212] porphobilinogen deaminase |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGAGA ACCGCATACG TATCGCAACC CGCAAGAGTC CGCTGGCCAT GTGGCAAGCT GAATTTGTTA AAGCCGAATT AGAACGCATT CACCCAGGTA TTGTGGTGGA GTTGCTGCCA ATGAGCACTA AAGGCGACGT TATCTTAGAT ACGCCGCTAG CCAAAGTGGG CGGTAAAGGT TTGTTCGTCA AAGAGCTTGA AGTCGCTATG TTAGACGATC TTGCCGATAT CGCCGTGCAC TCAATGAAAG ACGTGCCCGT CGACTTCCCA GAAGGCTTAG GCCTTGAAGT GATTTGCGAG CGCGAAGATC CCCGCGATGC CTTTGTATCG AATTTATATA AATCGATCAG CGAATTACCA TTAGGCGCAA CTGTGGGCAC CTCGAGCCTA CGTCGTCAAT GTCAGATACG TGCATCACGT CCCGACCTCA TCATCAAAGA TTTACGCGGT AACGTTGGAA CTCGTTTAGC TAAACTTGAT AACGGCGAAT ACGATGCCAT TATTCTTGCC GCTGCTGGCT TAATCCGTCT GAAATTGTCT GAGCGTATTG CCAGCTTTAT TTCAGCCGAA GAATCCTTAC CCGCCAACGG CCAAGGCGCT GTGGGTATCG AATGTCGCAT CAACGACGAA CGTGTTAAAG CGCTACTGGC GCCATTAGAG CATTTAGAAA CTCGCTACCG TGTTCTTGCC GAGCGCGCGA TGAACACTCG CCTTGAAGGT GGATGCCAAG TGCCGATTGG CGCATTTGCT GAAATCGATG GTGACGAGAT GACGCTACGC GGCCTAGTCG GTAACCCAGA TGGCAGTGAA ATCATCGAAG GCGTGATCAC AGGTCCAAAA ACCGAAGCCA CGCAATTAGG TGTTGCCCTT GCTGAAGAGT TACTCAGCAA AGGTGCCAAA AGCATTCTCG ACGCCGTTTA CGCTAAAGCC TAA
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Protein sequence | MSENRIRIAT RKSPLAMWQA EFVKAELERI HPGIVVELLP MSTKGDVILD TPLAKVGGKG LFVKELEVAM LDDLADIAVH SMKDVPVDFP EGLGLEVICE REDPRDAFVS NLYKSISELP LGATVGTSSL RRQCQIRASR PDLIIKDLRG NVGTRLAKLD NGEYDAIILA AAGLIRLKLS ERIASFISAE ESLPANGQGA VGIECRINDE RVKALLAPLE HLETRYRVLA ERAMNTRLEG GCQVPIGAFA EIDGDEMTLR GLVGNPDGSE IIEGVITGPK TEATQLGVAL AEELLSKGAK SILDAVYAKA
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