| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_3687 |
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| Symbol | |
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| ID | 7089621 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011663 |
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| Strand | - |
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| Start bp | 4378430 |
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| End bp | 4380649 |
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| Gene Length | 2220 bp |
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| Protein Length | 739 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 643462567 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_002359588 |
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| Protein GI | 217974837 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTAGTAG GTTTAGCAAA TCCACTCCAA CAGGCCTTGG TGAGTATTTT TAGTGAGTCT
CCGCTAGAAA CCTTAGAGCA AAATGTTGAC CGAGCACTTG AGACCATCAC ATTGCAGCTG
CATTGTGACG GAGTATTTGT ATTGACCGGC AGCCAGTCTC TGGATCGTTT ACGCACGCGT
AATTTGTATC TAAAACCCCA ATTTGCCAAA GGCCAACAGA CTCGAGTCTG GCCTTTAGCA
CGCATGCCAT TCTTTCGCTC CCTTGTCCGC ACCCCGCGAC TATTAAATCT GCCCGATGTG
AATACCTTGC CCGCCGATGC GCAGGCCGAG CGTGCCCTAT TAAGGGACTG GGACGTGAAG
AGTCTATTGG TATTGCCACC TGTGGTATTT GGCGAAACGC GTATTGCGCT GGGCGCAGTC
AATTGCTCCG AGTGTTGCGA ATGGAGCGAA GAGTTTATAA GTGAGTTTAA CCACGCCGCT
GTGATGATTG GCTCGGCGAT GGAACTGACG CGTATCGCCC TGAGCATGCT CGCCAGTGAG
CATAAATACT GTGAAGTCTT CAATCAGTTA CCCTTAGCCT GCGCCTTGTT AGATAAATAT
AATCAATTGA CTATGCTCAA TAAAGTCGCC CTGCAAACGC TGCCAATCCA ACATGGTTAT
GATTTATTCG ACATGGTGCG TGAGGAAGAA CATGCCATGT TAACTGATAC CTTGCATGTG
GTACGTGAAG GTGTGCTTGG TCAGGCTTGG TGTGAATTAC CGTTGAAATC TATCCATCAA
CTGGCTTGGT TGAAACTCAG TTTTAGCCAG ATCAGTGGCG ATAAAGATAC CTTAGTCATG
ATTGCCGAAG ATGTCAGCGA GAAGTATCGT CTAGCCGATG AGCTGTCGTT CCATGCCAAT
TATGATGCGC TCACAGGATT GCCCAATCGG TTACATTTCG AAGCCCTATT AGAAAACCTG
CTGCACGCCC ACGACGATAT GCCTATTTGC GTGGCGTTTC TCGATTTAGA CCAATTCCAA
GTCATCAACA ATATCAGTGG CCATCAGGCG GGCGATAAGC TGCTTTGCCA AGTGGCATTA
CGCTTAAAAC AGCTCGTGCG TAAGGGCGAT ATCGTCGCCC GTTTAGGTGG CGATGAGTTT
GGTATCTTGA TGCATTACTG CAATGTGGAC TCGGCGAAAC AAATCGCAAA ACGTATCTGT
ACCCAATTGG CGAACCATGA ATTTATTTGG GAAGGCCGCA GTCACAATGT CAGTGTCAGC
ATGGGGATTG CTAAACTCGA TAAAAAAGCC GCCGACATTT ATACCGTGAT GAGTCAGGCT
GATGCTGCTT GTCGCTTGGC GAAGGATCAA GGCCGCAATG GCTGGCATTT ATACAGTGCG
AGCGATCCTA AAATGAACCG TCTCTATACC GAGATGATGG CGTCGGTGGA CATAGTCGGC
GCACTGGCGT TAAACCAATT TGAGCTTTAT TTTCAAAGCA TAGTGCCATT AAATCGCGAG
GAGTCTGGTC TGCATTTAGA GATCTTACTG CGTATGGTGC AGGCCAACGG CACTATCGTG
TCTCCTGCCA TTTTCTTGCC CGCCGCCGAG CGATATAACT TAGCTTCTAA GGTCGACTTA
TGGGTGATCG ATAACTTGCT CAAGTGGGGC GGTTGCCATT TAGATATCTG GCAGCAATTG
GATCTCGTGT CGGTGAATTT GTCGGCGACC TCTTTGGGTG ACTTTGAGTT TATGAACTGG
CTAGAAATGC GTTTGATGGC CGAACCTGAG CTGGTGGACA AGCTTTGCAT CGAGATCACT
GAAACTGCGG CCGTGAGTCA GCTCGATCAA GCGACAAAGT TACTCGATAT ATTGCGTCCG
CTCAATTGTA AGTTAGCCCT CGATGACTTT GGGGCTGGCT TTTCTAGCTT TGCCTACCTT
AAGCGCCTTA ATGTGGACTT TGTGAAGGTG GATGGTCAGT TTGTAGTGAA CATCTGCGAA
GACAGTGCGG ATCAGGCGAT CGTTAAATCG ATTTGCCAAC TCGGCCAAGA CATGGGCTTT
GATGTGGTTG CCGAATTTGT CGAATCCCAA GATATTGGCC GGAAACTGCA AACCCTTGGC
GTCGACTATG CCCAAGGTTA CGCCATCAAT AAACCGATAC GGTTAGCTGA ATTACAGTCT
GGACTCAGTC AGCCTTGGCT CGAAAAACGT GAGACCTTTG CGGCCTATCC ACAACTCTAG
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| Protein sequence | MLVGLANPLQ QALVSIFSES PLETLEQNVD RALETITLQL HCDGVFVLTG SQSLDRLRTR
NLYLKPQFAK GQQTRVWPLA RMPFFRSLVR TPRLLNLPDV NTLPADAQAE RALLRDWDVK
SLLVLPPVVF GETRIALGAV NCSECCEWSE EFISEFNHAA VMIGSAMELT RIALSMLASE
HKYCEVFNQL PLACALLDKY NQLTMLNKVA LQTLPIQHGY DLFDMVREEE HAMLTDTLHV
VREGVLGQAW CELPLKSIHQ LAWLKLSFSQ ISGDKDTLVM IAEDVSEKYR LADELSFHAN
YDALTGLPNR LHFEALLENL LHAHDDMPIC VAFLDLDQFQ VINNISGHQA GDKLLCQVAL
RLKQLVRKGD IVARLGGDEF GILMHYCNVD SAKQIAKRIC TQLANHEFIW EGRSHNVSVS
MGIAKLDKKA ADIYTVMSQA DAACRLAKDQ GRNGWHLYSA SDPKMNRLYT EMMASVDIVG
ALALNQFELY FQSIVPLNRE ESGLHLEILL RMVQANGTIV SPAIFLPAAE RYNLASKVDL
WVIDNLLKWG GCHLDIWQQL DLVSVNLSAT SLGDFEFMNW LEMRLMAEPE LVDKLCIEIT
ETAAVSQLDQ ATKLLDILRP LNCKLALDDF GAGFSSFAYL KRLNVDFVKV DGQFVVNICE
DSADQAIVKS ICQLGQDMGF DVVAEFVESQ DIGRKLQTLG VDYAQGYAIN KPIRLAELQS
GLSQPWLEKR ETFAAYPQL
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