Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_3619 |
Symbol | gcvT |
ID | 7088734 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | - |
Start bp | 4297888 |
End bp | 4298982 |
Gene Length | 1095 bp |
Protein Length | 364 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 643462500 |
Product | glycine cleavage system aminomethyltransferase T |
Protein accession | YP_002359521 |
Protein GI | 217974770 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0404] Glycine cleavage system T protein (aminomethyltransferase) |
TIGRFAM ID | [TIGR00528] glycine cleavage system T protein |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTAACA AAACTATTCT GTTTAACAAG CACTTAGAAT CAAACGCTAA GATGGTCGAC TTCCACGGTT GGGACATGCC TCTCAACTAT GGTTCACAAA TCGAAGAACA CAATGCCGTG CGTCAAGACG CGGGTATGTT CGACGTTTCC CACATGACTG TGGTTGATGT GATTGGTAAC GACGCTTGTG CATTTCTGCG TAAGTTGCTG GCAAACGATG TGGCTAAGCT TAAAGTTCCA GGTAAAGCCT TATACGGCGG CATGTTAGAC GAAAATGCTG GCGTCATCGA CGACCTCATC ACTTACTACC TCACTGACAC TAACTACCGC GTGGTAGTGA ACTCAGCGAC CCGCGAAAAA GATCTCGCTT GGATCGCCAA GCAATCCCAA GGTTTTGATG TCACTGTGAC TGAACGTCCT GAGCTGGCGA TGATTGCCGT TCAAGGTCCT AATGCTAAAG CGAAAGCCGC AGCCGTGCTC AGTGCCGAGC AAAACACCGC CATCGAAGGC ATGAAACCTT TCTTCGGTAA GCAAGCCGGT TCTCTGTTTA TTGCGACTAC GGGTTACACA GGCGAAGCGG GCTACGAAAT TATCGTCCCA GAAGACGAAG CCCAAGCTAT GTGGCAAGCA TTGTTAGATC AAGGTGTTAA ACCTTGTGGT CTCGGTGCCC GTGACACACT GCGTCTTGAA GCCGGTATGA ATCTCTACGG CTTAGATATG GACGAAACCA TCAACCCATT GGCCGCCAAC ATGGGCTGGA CCATCGCATG GGAACCGAGC GACCGTGACT TTATCGGCCG TAAAGCCCTC GAAACACTTC GCGATGCCGG AACCGACAAA CTTGTTGGTC TAGTGATGGA AGAAAAGGGC GTGTTACGCC ATGATATGCC AGTATTTTTC ACCGACTCAG CCGGTGTTGA GCACCAAGGC GTGATTACCA GCGGTACTTT CTCGCCAACA TTGGGCTATT CTATTGCGAT GGCGCGTGTT CCTAACTCGA TTGGGGATAC GGCGGAAGTC GAAATGCGTA AAAAACGTGT GGCTGTTAGA GTAGTAGCGC CAAACTTTGT GCGCAACGGT AAACAAGCAT TTTAA
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Protein sequence | MANKTILFNK HLESNAKMVD FHGWDMPLNY GSQIEEHNAV RQDAGMFDVS HMTVVDVIGN DACAFLRKLL ANDVAKLKVP GKALYGGMLD ENAGVIDDLI TYYLTDTNYR VVVNSATREK DLAWIAKQSQ GFDVTVTERP ELAMIAVQGP NAKAKAAAVL SAEQNTAIEG MKPFFGKQAG SLFIATTGYT GEAGYEIIVP EDEAQAMWQA LLDQGVKPCG LGARDTLRLE AGMNLYGLDM DETINPLAAN MGWTIAWEPS DRDFIGRKAL ETLRDAGTDK LVGLVMEEKG VLRHDMPVFF TDSAGVEHQG VITSGTFSPT LGYSIAMARV PNSIGDTAEV EMRKKRVAVR VVAPNFVRNG KQAF
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