| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_3552 |
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| Symbol | |
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| ID | 7088665 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011663 |
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| Strand | + |
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| Start bp | 4216292 |
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| End bp | 4216825 |
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| Gene Length | 534 bp |
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| Protein Length | 177 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 643462436 |
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| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
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| Protein accession | YP_002359457 |
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| Protein GI | 217974706 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.00492938 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGACGGCAG GGATACTCCC ACTCAATAGC GCAATGTCTG ACTTTGAACT GGCCACCTTA
GCCAGCCAAG GCAACAGAGC CGCATTTAAA CTGCTGTATC AAAGCCATCA CCAACGTATT
TATGCGCTAT CACTGCGCCT TTGTGGTCAT AAAACTATGG CGGAAGACAT TACCCAAGAG
TGTTTTATTT TAGTGTGGCA GAAGTTGCCG CAATTTCGAG GTGAGAGTCA GTTTTCGACT
TGGTTACACA GCATTTGTGT CAATCAAGCC TTGAGCAGTA TTCGTAAACA ACAATCATTC
TGGGCACGAT TTATCCCACT GGAAAATGAG ACTGAACCTA TGAGTTCAGA TGAAAGTTAT
AGCGGATTAG ATAAGTTGAT TTTCAAACTG CCGCAGCGGG CACGCATGGT GTTCGTACTC
TGCGCCATCG AAGGCTATCA ACACGATGAA ATCGCTGATT TGCTTGGCAT TGCCGTCGGC
ACTAGCAAGA CCCAATACCA TAGAGCTAAG CAACTACTAC AGGAGATGCT GTAA
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| Protein sequence | MTAGILPLNS AMSDFELATL ASQGNRAAFK LLYQSHHQRI YALSLRLCGH KTMAEDITQE
CFILVWQKLP QFRGESQFST WLHSICVNQA LSSIRKQQSF WARFIPLENE TEPMSSDESY
SGLDKLIFKL PQRARMVFVL CAIEGYQHDE IADLLGIAVG TSKTQYHRAK QLLQEML
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