| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_3550 |
|---|
| Symbol | |
|---|
| ID | 7088663 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | + |
|---|
| Start bp | 4212828 |
|---|
| End bp | 4213775 |
|---|
| Gene Length | 948 bp |
|---|
| Protein Length | 315 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 643462434 |
|---|
| Product | ribose-phosphate pyrophosphokinase |
|---|
| Protein accession | YP_002359455 |
|---|
| Protein GI | 217974704 |
|---|
| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0462] Phosphoribosylpyrophosphate synthetase |
|---|
| TIGRFAM ID | [TIGR01251] ribose-phosphate pyrophosphokinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0000537383 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGCCCGACA TCAAGCTCTT TGCTGGGAAC GCCACCCCCA GTCTCGCTAA AAAGATAGCC
GATCGTCTAT TTTGCAAACT CGGAGACGCA GTGGTTGGTC GTTTCAGCGA TGGTGAAATC
AGTGTCCAAA TTAACGAAAA TGTACGTGGT GCCGATGTGT TCATCATCCA ATCCACTTGC
GCGCCGACAA ACGACAACCT GATGGAACTC ATCGTGATGG TTGACGCGCT GCGCCGTGCA
TCTGCTGGCC GTATCACAGC CGTTATTCCT TACTTTGGTT ATGCTCGTCA AGACCGTCGC
GTTCGTAGCG CCCGTGTACC TATTACTGCA AAAGTCGTTG CCGATTTCCT GTCTAGCGTG
GGTGTTGACC GCGTTCTGAC CTGTGACCTG CACGCTGAGC AAATCCAAGG TTTCTTCGAC
GTTCCCGTTG ATAACGTATT CGGTAGCCCA GTGCTGCTAG AAGATATGTT AGCGAAGAAC
TTAGATAATC CAGTCGTTGT TTCTCCAGAC ATCGGTGGTG TTGTTCGCGC TCGCGCAGTA
GCAAAACTGT TGGATGATTC TGATTTAGCG ATCATTGATA AACGTCGCCC ACAAGCAAAC
GTTGCTCAAG TTATGCACAT CATTGGTGAT GTTCAAGGTC GTGACTGCAT TATCGTTGAC
GATATGATCG ACACAGGCGG CACTCTGTGT AAAGCGGCTG AAGCCTTAAA AGAACATGGT
GCAAACCGCG TATTTGCTTA CGCAACTCAC CCAGTGTTCT CTGGCAAAGC GGCTGAAAAT
ATCGCTAACT CAGTGATTGA TGAAGTTATT GTGACTGACA CTGTTCCTTT AAGCCCAGAA
ATGTTAAAAG TGGCTAAAGT GACTCAGTTA ACTATGTCTG CGGTACTGGC TGAGGCAATT
CGTCGCGTAA GCAACGAAGA GTCTATTTCT GCCATGTTCC GTCACTAA
|
|---|
| Protein sequence | MPDIKLFAGN ATPSLAKKIA DRLFCKLGDA VVGRFSDGEI SVQINENVRG ADVFIIQSTC
APTNDNLMEL IVMVDALRRA SAGRITAVIP YFGYARQDRR VRSARVPITA KVVADFLSSV
GVDRVLTCDL HAEQIQGFFD VPVDNVFGSP VLLEDMLAKN LDNPVVVSPD IGGVVRARAV
AKLLDDSDLA IIDKRRPQAN VAQVMHIIGD VQGRDCIIVD DMIDTGGTLC KAAEALKEHG
ANRVFAYATH PVFSGKAAEN IANSVIDEVI VTDTVPLSPE MLKVAKVTQL TMSAVLAEAI
RRVSNEESIS AMFRH
|
|---|
| |