| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_3546 |
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| Symbol | prfA |
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| ID | 7088659 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011663 |
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| Strand | - |
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| Start bp | 4208605 |
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| End bp | 4209696 |
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| Gene Length | 1092 bp |
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| Protein Length | 363 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 643462430 |
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| Product | peptide chain release factor 1 |
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| Protein accession | YP_002359451 |
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| Protein GI | 217974700 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0216] Protein chain release factor A |
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| TIGRFAM ID | [TIGR00019] peptide chain release factor 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00646422 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0000410243 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAGGAAT CCGTTATCCG CAAGCTGGAA GGCTTGCTCG AGCGCAATGA AGAAGTCATG
GCTTTGCTGG GTGATGCTAG CGTCATTTCT GATCAAGACA GGTTTCGCGC GTTATCGAAA
GAATATGCCC AGTTAGAAGA TGTTGTTGCT GGCTTTAAAG CTTATCAGCA AGCGCAGGTC
GATCTCGATT CTGCCAAAGA AATGCTGGAA GAAGACGATG CTGAAATGCG CGAAATGGCA
CAGGAAGAGA TGAAAGCCGC TAAGGCTAAG CTCGAACATC TTGAAGATGA ACTGCAAATT
CTATTACTGC CAAAAGATCC TGACGACGAT AAAAACGCTT TCGTTGAGAT CCGTGCGGGT
GCAGGCGGCG ATGAAGCGGC CATTTTTGCA GGTGACTTAT TCCGCATGTA CAGCCGTTAT
GCCGAAGCAA ATCGCTGGCA GATCGAAATC ATGAGCTGTA ACGAAGGCGA ACATGGTGGC
TTCAAAGAAG TGATCATGAA GGTGAGTGGC GACGGCGTAT ACGGCAAACT TAAGTTTGAG
TCTGGCGGTC ACCGCGTACA ACGTGTGCCA GAAACCGAAT CTCAAGGCCG TGTGCATACT
TCAGCGGTTA CTGTGGTTGT ATTACATGAA GTGCCTGAAG CAGAAGCGAT TTCAATCAAT
CCAGCCGATC TGAAAGTTGA TACTTTCCGT TCATCGGGCG CGGGTGGTCA GCACGTTAAC
AAAACCGATT CTGCCATTCG TATTACCCAC ATTCCAACAG GGATCGTGGT GGAATGCCAA
GATCAACGTT CGCAACATAA GAACCGTGCC CAAGCCATGA GTGTACTGGC CGCACGTATT
CAAGCTCTTG AAGATGAAAA ACGCCGTAGC GCCGAAGAAT CGACCCGTCG TAGTCTGGTT
GCCAGTGGCG ATCGCTCCGA ACGTGTGCGT ACTTACAACT TCCCGCAAGG CCGCGTGAGC
GAACACCGCA TCAACTTGAC CTTATATCGC TTGAACGAAG TGATGGAAGG CGATCTCGAT
GCTATTTTAT TGCCTCTGAT GCAAGAGCAT CAAGCCGATC AGTTAGCCGC ACTGGCTGAC
GAGCAGGGGT AG
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| Protein sequence | MKESVIRKLE GLLERNEEVM ALLGDASVIS DQDRFRALSK EYAQLEDVVA GFKAYQQAQV
DLDSAKEMLE EDDAEMREMA QEEMKAAKAK LEHLEDELQI LLLPKDPDDD KNAFVEIRAG
AGGDEAAIFA GDLFRMYSRY AEANRWQIEI MSCNEGEHGG FKEVIMKVSG DGVYGKLKFE
SGGHRVQRVP ETESQGRVHT SAVTVVVLHE VPEAEAISIN PADLKVDTFR SSGAGGQHVN
KTDSAIRITH IPTGIVVECQ DQRSQHKNRA QAMSVLAARI QALEDEKRRS AEESTRRSLV
ASGDRSERVR TYNFPQGRVS EHRINLTLYR LNEVMEGDLD AILLPLMQEH QADQLAALAD
EQG
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