| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_3540 |
|---|
| Symbol | |
|---|
| ID | 7088653 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | - |
|---|
| Start bp | 4203307 |
|---|
| End bp | 4204155 |
|---|
| Gene Length | 849 bp |
|---|
| Protein Length | 282 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 643462424 |
|---|
| Product | 2-dehydro-3-deoxyphosphooctonate aldolase |
|---|
| Protein accession | YP_002359445 |
|---|
| Protein GI | 217974694 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2877] 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase |
|---|
| TIGRFAM ID | [TIGR01362] 3-deoxy-8-phosphooctulonate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0000358724 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAGTAATA AAATCATAAA CCTAGGTTCA ATCGAGATTG CTAACGATAA ACCTTTCGTG
TTGTTTGGTG GCATGAACGT GCTTGAGTCT CGCGATCTTG CTATGTCGAT TGCTGAAACC
TACGCCGAAG TGACCCAAAA ACTAGGTATT CCTTATGTGT TTAAGGCGTC CTTTGATAAG
GCGAATCGCT CTTCAATCAA CTCTTATCGT GGCCCTGGCA TGGAAGAAGG TTTGAAGATT
TTTGAAGAAA TCAAAAAGAC CTTTAACTTA CCTTTGATCA CTGACGTGCA TGAAGTGCAC
CAGTGTGCGC CTGTTGCTGA AGTGGTTGAT ATCATTCAGT TGCCAGCATT CTTAGCCCGC
CAGACTGATC TGGTTGTCGC TATGGCAAAA ACCGGCGCTA TCATCAACGT GAAAAAACCA
CAGTTTTTAG CGCCGCACGA AATGCGCCAC ATCATCACTA AGTTTAACGA AGCGGGCAAT
GACGAGATCA TCCTGTGTGA ACGTGGTTCA AGCTTTGGTT ATAACAACTT AGTCGTTGAT
ATGTTGGGCA TGGATGAGAT GAAACAATCT GGCTACCCAG TGATTTTCGA TGCGACCCAT
GCGCTGCAAC GCCCTGGTGG CCGTGCCGAT TCTGCTGGCG GACGTCGTGC ACAGGCGACC
GAATTAGCGC GCAGCGGTAT GGCGCTAGGT TTAGCGGGTC TATTCATTGA AGCACATCCC
GATCCTGATA ACGCTAAGTG CGACGGCCCA TGTGCCTTAC CTTTGCATCA GTTAGAAAAT
TATCTGAAGC AAATGAAAGC AATTGACGAT TTGGTTAAGT CCTTCGAGCC AATCGATACC
AGCAAGTAA
|
|---|
| Protein sequence | MSNKIINLGS IEIANDKPFV LFGGMNVLES RDLAMSIAET YAEVTQKLGI PYVFKASFDK
ANRSSINSYR GPGMEEGLKI FEEIKKTFNL PLITDVHEVH QCAPVAEVVD IIQLPAFLAR
QTDLVVAMAK TGAIINVKKP QFLAPHEMRH IITKFNEAGN DEIILCERGS SFGYNNLVVD
MLGMDEMKQS GYPVIFDATH ALQRPGGRAD SAGGRRAQAT ELARSGMALG LAGLFIEAHP
DPDNAKCDGP CALPLHQLEN YLKQMKAIDD LVKSFEPIDT SK
|
|---|
| |