Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_3520 |
Symbol | |
ID | 7088633 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | - |
Start bp | 4184876 |
End bp | 4185814 |
Gene Length | 939 bp |
Protein Length | 312 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 643462404 |
Product | ABC transporter related |
Protein accession | YP_002359425 |
Protein GI | 217974674 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.12948 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.00888857 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCGAATA TTACCCATGC TCTGGTACTC GAAGGGCTTA AAAAAACCTA TAAAGGCGGC GTCGAAGCGG TCAAAGGCAT CAGCCTCACC GTCAATCAAG GGGATTTCTT TGCCTTGCTC GGCCCCAATG GTGCGGGTAA ATCCACCACG ATTGGTATTA TTAGCTCCTT AGTGCAGAAG AGTTCAGGTT CGGTCAAAGT CTTTGATTAT GATATCGATA AGCAGCTAGA ACACGCCAAG CTTTGTATTG GTCTAGTGCC GCAAGAGTTT AACTTCAACC AGTTTGAAAC CGTACTGCAA ATCGTGGTGA ATCAAGCGGG TTACTATGGT GTGCCTAAGC CTGTTGCCCT TGAGCGCGCC AAAAAATACT TAAGCCAACT GGATTTGTGG GAAAAACGTA ATAGCCAATC GCGGGAATTA TCCGGCGGCA TGAAGCGACG GTTAATGATC GCCCGCGCCC TGATGCACGA ACCTAAGTTG TTGATTTTAG ATGAGCCTAC CGCAGGCGTG GATATTGAAC TGCGTCGCTC TATGTGGGAG TTCCTCAAAC AAATTAATCA GCAAGGCGTG ACGATCATCC TGACCACCCA TTACCTTGAA GAGGCTGAAA TGCTTTGCCG TAATATCGGC ATTATCGACA AAGGCATTTT AGTGGAATGC ACGAGCATGA AGGCGCTGCT CAGTAAGCTG AATATGGAGA CATTTATTCT CGATCTGCGT CGCGATACAG CAACGGCACC AGTACTCGAT GGCATGGCTT GTCGCTTAAC TGACTCTCAT ACCTTAGAGG TGGATGTGGT TAAAGAGCAA AATCTCAACG ATGTCTTTAG CCAATTAAGT GCGGCCAATA TAGAAGTGCT ATCGATGCGT AACAAGTCTA ATCGCTTAGA AGAACTCTTC GTCGAACTCG TGAAGAAAAC TCAGGGAGTC TCTGCATGA
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Protein sequence | MANITHALVL EGLKKTYKGG VEAVKGISLT VNQGDFFALL GPNGAGKSTT IGIISSLVQK SSGSVKVFDY DIDKQLEHAK LCIGLVPQEF NFNQFETVLQ IVVNQAGYYG VPKPVALERA KKYLSQLDLW EKRNSQSREL SGGMKRRLMI ARALMHEPKL LILDEPTAGV DIELRRSMWE FLKQINQQGV TIILTTHYLE EAEMLCRNIG IIDKGILVEC TSMKALLSKL NMETFILDLR RDTATAPVLD GMACRLTDSH TLEVDVVKEQ NLNDVFSQLS AANIEVLSMR NKSNRLEELF VELVKKTQGV SA
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