Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_3442 |
Symbol | |
ID | 7086056 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | + |
Start bp | 4088993 |
End bp | 4089778 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 643462328 |
Product | Spermine synthase |
Protein accession | YP_002359349 |
Protein GI | 217974598 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0421] Spermidine synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 55 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCAAGCGA GCCAAACAGC TAAACCGAGT AATAAACCCA ATATGGCCGA TTCTACCCTC TTACATGAAA CCCAAGACGC ACTAGGCCCA ATCCGCGTAA TCGATTACGA CGACTCACGG ATCCTGTCCT TTGGGGATAA CGACGAGCAG AGTAAAATCC TCAAGGCTGC GCCCCATATT CCCCAGCACA CTTATGTGCA AGCCATGTTG TTGGTTTTGC TGTTTTGTAA GCCTAAGAGC GCCATCGTTT TAGGTTTAGG CGGCGGCTCG ATTATCCACT CTCTACGCAA TTTCGACGCG GCAATAAAGT TAACGGCGGT AGAGTTACGC CCCGCGGTGA TTGAATTAGC TAAGCGCTAT TTTCAACTGC CGATAGGTAA AAAGCTCAAT CTTATCAATG ATGATGCCAT CGCCTTTTTG GCCGCAGGCG ATCATAAAAA AGTCGATGTG ATTTTTGCCG ATATCTACAC AGCCAAAGGC GTTGAAACGG GACAGCTTTC GCCAGTATTC CTTGAGCAAT GCACTAACCT CATTAAACCC AACGGTTATT TAGTGCTGAA CTGCTGGAAA GAACATAGCC AAAATCGCGA GTTGTTAGCC GACTTACAAC AGCACTTTGC CCATGTGAAT GCTTGCCTCA CTGGCGGCGG TAATTGGGTG ATATTTGCGA GCCAATCGCC ACAGCTTTTA GGCACGTCGG CCCTGAAAAG TCAGGCTCAA TCTTTGTCGC AACAATTGGG GTTTGCCCTT GAGCGATCAC TGACACGCTT TGGGCCTTGG ATTTAA
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Protein sequence | MQASQTAKPS NKPNMADSTL LHETQDALGP IRVIDYDDSR ILSFGDNDEQ SKILKAAPHI PQHTYVQAML LVLLFCKPKS AIVLGLGGGS IIHSLRNFDA AIKLTAVELR PAVIELAKRY FQLPIGKKLN LINDDAIAFL AAGDHKKVDV IFADIYTAKG VETGQLSPVF LEQCTNLIKP NGYLVLNCWK EHSQNRELLA DLQQHFAHVN ACLTGGGNWV IFASQSPQLL GTSALKSQAQ SLSQQLGFAL ERSLTRFGPW I
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