| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_3441 |
|---|
| Symbol | |
|---|
| ID | 7086055 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | - |
|---|
| Start bp | 4088383 |
|---|
| End bp | 4088928 |
|---|
| Gene Length | 546 bp |
|---|
| Protein Length | 181 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 643462327 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002359348 |
|---|
| Protein GI | 217974597 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0668] Small-conductance mechanosensitive channel |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 56 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAAATC AAATCCTGCT TGCCTGTATT TATCTTGCAG TGTTTCTCTT TTTACAGCGC
GCCTTAACCC ATTGGGTGAG AAAACTGGCG CAAATGAAGC AAGTGAGTGT GGCGAGGACC
AGTTTAGTGA CCCGTTTTAT TTCCTATGTG ATGTTTTTTA TTACTCTGTC ACTGATGGCT
GTCTCGCTCG GGCTGGGCTA TCAGGATGTG TCGCTATTTG TGTCATCCGC CTTCGCTGTG
ATGGGCGTGG CATTAGTTGC TCAGTGGTCG ATATTGAGTA ACTTAACCGC AGGCGTGCTG
ATCTTTTTCG TGTTTCCCTA TCGTATCGGC GAGCGTATTC GAGTGGTTGA TAAGGATGAA
GATATTAGCG GCGTGATCAT CGAAATCGCG TTATTCCATG TGCTGATCCA TCGCGATAAC
GGCGATACCA TTACTTATCC CAATAACTTG ATGCTGCAAA AGGCAGTGTT AAAGCTAGCC
GATCAGACTC CCTTAGCCGA ACGTCAGGCG TTACTCGAAG GCAAGAAGAA GTTTGATCCT
GAGTAG
|
|---|
| Protein sequence | MTNQILLACI YLAVFLFLQR ALTHWVRKLA QMKQVSVART SLVTRFISYV MFFITLSLMA
VSLGLGYQDV SLFVSSAFAV MGVALVAQWS ILSNLTAGVL IFFVFPYRIG ERIRVVDKDE
DISGVIIEIA LFHVLIHRDN GDTITYPNNL MLQKAVLKLA DQTPLAERQA LLEGKKKFDP
E
|
|---|
| |