| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_3424 |
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| Symbol | rumB |
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| ID | 7086038 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011663 |
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| Strand | - |
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| Start bp | 4071123 |
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| End bp | 4072295 |
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| Gene Length | 1173 bp |
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| Protein Length | 390 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 643462310 |
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| Product | 23S rRNA methyluridine methyltransferase |
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| Protein accession | YP_002359331 |
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| Protein GI | 217974580 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2265] SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase |
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| TIGRFAM ID | [TIGR02085] 23S rRNA (uracil-5-)-methyltransferase RumB |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGTGCTG CTATTGTGAA TGCCGTTAAG CAATGTGGTT ATTTTAATCA AGGTCAGTGC
CTTTCTTGCC GGCATATTCA GCAGCCTCTA GCGCAGCAAG TAGCGGTTAA AACCCAAACG
TTACTGCAAT TACTCGCGCC TTTTATTCCC GCAAATTCGG CAGAACTTTT TCTGCCTCCC
ATTACTGGCG ATGACAGCGG CTTTCGTAAT AAAGCCAAAA TGGTAGTACT CGGCGCCGCC
CATGAACCCG TGTTGGGGAT TGTGAGCCCA AGTGGCGAGG CGGTGGATCT TTGCGACTGC
CTGTTATATC CAGCTGATAT GCAAGCCTTG TTGCACCGTT TAACCCGCTT TGTGCAGCAG
GCGGGCCTTC CTCCCTATCG GGTTGATAAA GCCAAGGGCG AGCTTAAGTT TATTCTGCTG
ACCCGCAGCC AAGTACGCGG CGAATATCTG CTGCGTTTTG TGCTGCGATC ACACAATGGC
ATTGAACGTA TCGAACGCGA ATTACCTGCA TTACTGGCCG AATATCCGCA AATTAAAGTG
GTGTCAGTCA ATATCCAACC AGTTCATATG GCAATCCTTG AGGGCGATGA AGAGATTTTT
TTAACTGAGA ATACTAGGCT TGAAGAACGT TTTAATCATG TGCCTTTGTT CATTCGGCCC
AAGAGCTTTT TCCAGACCAA TCCGCAGGTT GCGGCTCAGT TATATCAAAC CGCCCGTGAG
TGGGTTGCCG AGTTTTCTCC TCGCTCGTTA TGGGATCTGT TTTGTGGCGT CGGCGGTTTC
GGACTACACT GCGCATCCAA AGACATAACA CTCACAGGGA TTGAAATTGA AGCCGAGGCG
ATTGCCTGCG CGCAAATGTC AGCGCAAATG ATGGGGCTCG AAAACGTGCA ATTTATGGCG
CTCGATTCCA CCGACTTTGC CAAGGGCAAA AGCGCTGCCG ATAAGCCGGA TTTGATCATT
GTTAATCCAC CAAGGCGCGG CATTGGCGAG GCTTTATGCC AGTCATTAAG CGAGTTTGCA
CCTAAGGCAA TTCTTTATTC CAGCTGTAAT CCCAAAACCT TAGCGAAAGA TCTCGAGCAT
ATTCAAGGTT ATCACTTAAC CAAGGTGCAG CTATTTGATT TATTCCCCCA CACGGATCAT
TTTGAAGTCT TAGCTATGTT GGTGAAGGAT TAA
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| Protein sequence | MSAAIVNAVK QCGYFNQGQC LSCRHIQQPL AQQVAVKTQT LLQLLAPFIP ANSAELFLPP
ITGDDSGFRN KAKMVVLGAA HEPVLGIVSP SGEAVDLCDC LLYPADMQAL LHRLTRFVQQ
AGLPPYRVDK AKGELKFILL TRSQVRGEYL LRFVLRSHNG IERIERELPA LLAEYPQIKV
VSVNIQPVHM AILEGDEEIF LTENTRLEER FNHVPLFIRP KSFFQTNPQV AAQLYQTARE
WVAEFSPRSL WDLFCGVGGF GLHCASKDIT LTGIEIEAEA IACAQMSAQM MGLENVQFMA
LDSTDFAKGK SAADKPDLII VNPPRRGIGE ALCQSLSEFA PKAILYSSCN PKTLAKDLEH
IQGYHLTKVQ LFDLFPHTDH FEVLAMLVKD
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