Gene Sbal223_3383 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_3383 
Symbol 
ID7087209 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp4013790 
End bp4014635 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content50% 
IMG OID643462269 
ProductApbE family lipoprotein 
Protein accessionYP_002359290 
Protein GI217974539 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1477] Membrane-associated lipoprotein involved in thiamine biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATACGTC GCGCTAAGCC ATTACTCGGG ACACTGGTGG AAATCGCTGC CGAGTCACTG 
CCACATCAAG GCGGTGAGGC ACAACTTAAA GATAAAGCCT TGGAAACTGC TATAAGCGCG
GCTTTTTCGC GTGTGACGCA TATTGGTCGG TTACTGAGTT TTCATCAGCA AGACAGTGAG
TTAAATCAAC TAAATCGCCA GCCGGGGACA TGGATTCGTG TAAGCCAAGA CAGTTTACGA
GTGCTCAAGT TAGCTAAGTG GCTAGGCAAG GCGAGCAACA ACTTGTTCAA TTGTACCGTC
GGCGGGGAAA TGATGTCCCG CGGCGCTTTG CCTGCCTATC TTGGTATGCC TTTGTTATTG
CAAGGCGAGT GGCAAGATAT TGAAATAAAA GATAATCAAG TGCGATTAGC TAGACCACTC
ATTTTGACCT TAGATGGCAT AGCCAAAGGT TATGCGGTCG ATATGGCGGT GAGTGAGCTG
CGCCGTGCAG GTGTCGGCGG TGGTTGGGTG AATGCCGGTG GCGATTTAAA AGTCTTTGGC
AGTGCCTCTT TAAATGTGCT CTGCCGTGGC CCATTGGGAT TGAGCCAAAA GATCTGCGTG
AGCAATATGG CGCTGGCGAG TTCGCGAGTG TCTCAAACTT TAAGCCATGA TTATCCGGCG
TTATTACTGC CAACGGGCAA TGTTACTGAT GTAAATGTCG ATACTGAACG TGAGCGTATT
GTCAGTGTGA GTGCGCCCTT TGCTTGGCGC GCCGATGCGT TGACTAAGGT TGCAGGTTAC
CTAAGCTCTG ACTCCGCCGC TGACAAAATT GCCCACTTAG GCGGTCGATT AGTCAGTTTT
GATTGA
 
Protein sequence
MIRRAKPLLG TLVEIAAESL PHQGGEAQLK DKALETAISA AFSRVTHIGR LLSFHQQDSE 
LNQLNRQPGT WIRVSQDSLR VLKLAKWLGK ASNNLFNCTV GGEMMSRGAL PAYLGMPLLL
QGEWQDIEIK DNQVRLARPL ILTLDGIAKG YAVDMAVSEL RRAGVGGGWV NAGGDLKVFG
SASLNVLCRG PLGLSQKICV SNMALASSRV SQTLSHDYPA LLLPTGNVTD VNVDTERERI
VSVSAPFAWR ADALTKVAGY LSSDSAADKI AHLGGRLVSF D