| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_3356 |
|---|
| Symbol | |
|---|
| ID | 7087182 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | - |
|---|
| Start bp | 3980308 |
|---|
| End bp | 3982311 |
|---|
| Gene Length | 2004 bp |
|---|
| Protein Length | 667 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 643462242 |
|---|
| Product | methyl-accepting chemotaxis sensory transducer |
|---|
| Protein accession | YP_002359263 |
|---|
| Protein GI | 217974512 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.386472 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGATATA TGAAACGTTC TCTAAGTTTG CAGTTAGTGG TTACTATCGT TGGTGCGCTT
GCTGTACTGC TTACCTTAGT CGCCGCTTTG TTGGTGACGA AAGAAAGTGA TAACACGCGA
AAGCAGGTCG ATGCGGATAT TTCGGCGCTG GTTGCCTTAA AAGCCAATGA GATTAGCGGT
TACTTTATTG CTAAGGGCCA AGTGATCCAT TCAGTGTTTG CCGAGCCGGG TTTAGTGAAG
TGGTTTACTC AGTATCACGC CCGTGGCAGT CATCTAGCAG CTGATCGCCA GTACCAAGAC
ATTATTGGTT ACTTTAAGTC TTTCTCCGAT CGCAATAGTG ATGTTAAATC GGTGTTTTTT
GGCTCGGCCA ATACCTTCGA GTACTTTGAC CTCAATGGCC GTTTTGATGG CGATCCAGAT
TACTACACCA ACAAACGACC TTGGTGGCAG GAAGCGATCG ATCAAGCCGG GCTCTTTGTT
GGCGATCCAG CAGTCGATGC GAACGATGGT TCAATTTCTG CCACGGTTAA AACCCCCGTT
TATGCGGCGA ATGGCGAGCT GATTGGTATC GGCGGCATGG ATATCTTGAT TGATACTATT
GGTAAATCCC TGCTGGCACC GATTAAATAC CGTGATTTCG GCCAAGCTTT CTTAATGACA
GACGAAGGCA AGCTAGTGTA TTTCCCTGGT TTTTCCGATC GTTTCCCGCC GGGTTCTTTG
GCGAATCAAG TGGATACTCA GTTTAAGGAT ACATCAGGAT TTTCTGCATT ACGACAACAG
ATGCAAAGGG AAGCGCAAGG GTTTGCTAAT GTTACATTTA ATGGCGTTCC CCAGCGGGTG
AGCTTTGTGA CTGTGGGCGG CGATTATCCC AAACAAAAGT GGCACTTAGC CTTTATGTTG
CCTCACGAAG TGATTGAAGC GCCAGTGACC GCCGCGTTCT GGAATGCCAG TATGGTTGCC
ATAGGCATCA TGCTGCTAAT GGGCGTGACG GTATGGTTGA TGTTGCTGCC CTTTAGACGC
CAATTAGCTA AGTTATTGGA TGCGATGGAG GATATCGCCG AAGGTGACAG TGATTTATCA
AAACGTATTC TAATGGATCG AGAAGATGAG TTAGGCAAAC TTGGCGATGC CTTTAACCGC
TTTGCCGAGA AAGTGCAGCA CATGTTGTTG GATACGCGCA GCTTAACCCA AGAGGTAGGC
ACGGGTGTTG TCGATGCGCG GCAAATCTGC GACTTAGCCG TGTCGTCGGT CTCATCGCAA
AAGCAGCAGA TAGATTCAGT TGCTACGGCC GCAACGCAAA TGGCGCAGAC CAGTCAAGAA
ATGGCTGTCA GTGCCCAGCG GGCGAATGAT TTTGCCCAGA AGGCGCAAAA TCAGGCCCAC
GACGGTACAC AGATTGTTTC CCGTGCGACC GAAGGGATGA AAGCGTTGTC GCAGCAAGTG
ATCGCCGCGG CGAAAGTGAT TAAACACTTA CGCAATAGCT CAGAGCAAAT CGGTGAAGTC
TTGAGCGTGA TCCGTAACAT TGCCGAGCAA ACTAATCTAT TAGCCCTTAA CGCAGCAATT
GAAGCGGCGC GTGCGGGTGA GCAAGGCCGT GGCTTTGCTG TGGTGGCAGA CGAAGTGCGC
ACGTTGGCAT CGCGTACCCA AGATTCTACC GCTAACATTC AAGGCATTAT CCAAACCTTG
CAACAAAGCG CATTGCAGGC TGAGCAAGTG ATGGAATCGG GCGTTGAGCA AGCGAAAGCG
GGGCAAGAGC TAACGACTCA GGTCGAAGCG GCACTGAATG ATATTGCGAC GGCGATTATG
TCAATCCAAC AGCAAACGGT TGAAATAACC GTAGCAATCG ATCAGCAAGC CGTGGCGGCC
GAGGAAGTGG CGCTCAATGT CGATAATGTG CGGGGGTTGT CGGATCAGTC TTTGCTTTCG
AGTCAGGACT TGTCTCAAAG CTTGCAAGGC TTTGAGGATA TGACCCGCGC GCTCACACGC
AACATCGGCC AATTTAAGAT TTAA
|
|---|
| Protein sequence | MGYMKRSLSL QLVVTIVGAL AVLLTLVAAL LVTKESDNTR KQVDADISAL VALKANEISG
YFIAKGQVIH SVFAEPGLVK WFTQYHARGS HLAADRQYQD IIGYFKSFSD RNSDVKSVFF
GSANTFEYFD LNGRFDGDPD YYTNKRPWWQ EAIDQAGLFV GDPAVDANDG SISATVKTPV
YAANGELIGI GGMDILIDTI GKSLLAPIKY RDFGQAFLMT DEGKLVYFPG FSDRFPPGSL
ANQVDTQFKD TSGFSALRQQ MQREAQGFAN VTFNGVPQRV SFVTVGGDYP KQKWHLAFML
PHEVIEAPVT AAFWNASMVA IGIMLLMGVT VWLMLLPFRR QLAKLLDAME DIAEGDSDLS
KRILMDREDE LGKLGDAFNR FAEKVQHMLL DTRSLTQEVG TGVVDARQIC DLAVSSVSSQ
KQQIDSVATA ATQMAQTSQE MAVSAQRAND FAQKAQNQAH DGTQIVSRAT EGMKALSQQV
IAAAKVIKHL RNSSEQIGEV LSVIRNIAEQ TNLLALNAAI EAARAGEQGR GFAVVADEVR
TLASRTQDST ANIQGIIQTL QQSALQAEQV MESGVEQAKA GQELTTQVEA ALNDIATAIM
SIQQQTVEIT VAIDQQAVAA EEVALNVDNV RGLSDQSLLS SQDLSQSLQG FEDMTRALTR
NIGQFKI
|
|---|
| |