Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_3287 |
Symbol | |
ID | 7087668 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | + |
Start bp | 3904600 |
End bp | 3905313 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 643462173 |
Product | two component transcriptional regulator, winged helix family |
Protein accession | YP_002359194 |
Protein GI | 217974443 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0000200523 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.324308 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAAGCC CACAATCGAA CCACAGAGTA TTATTGGTTG AAGACGACGT TCGCCTAGCA AACTTGATTG TAGATTACCT AAAATCCCAT GGTATGCATG TTGAAGTTGA ACGCCGTGGC GACACAGTAT TAACGCGATT AATCAATTAC AAGCCAGATA TCATACTGTT AGACATTATG CTGCCGGGCA TGGATGGCCT CACCCTGTGT GAGAAACTGC CCGACTATTT TGCCGGCCCA ATCCTGCTAA TGAGCGCGCT TGGCTCAAGC GAAGATCAAA TCAAAGGCTT AGAACTCGGT GCCGATGACT ATGTGGTTAA GCCCGTTGAT CCTGCTCTGT TAGTGGCGCG GATTAACAAC TTACTTCGTC GTCAAAATCA GCCACCTCAG GCAGAATCCC ACTGCTTGAC CTTTGGTAAA CTGAGTATCG ACCCGCATAC CCACGCGATT CGCCTCAATG AAACTGAAAT CGATCTCACC AGCCATGAAT TCGAGTTGCT GTGGTTACTG GCCTCACAAG CTGGCCAAGT GCTCAGCCGT CAGTATATTT ATCAGCTGTT ACTCAATATT GATTTCGATG GTAAAGATCG AAAAATTGAT GTGCGTATCT CTAGATTACG TAAAAAACTC AACGATAATA TCGAGACACC GTTCAGAATT AAAACCGTTT GGGGACAAGG TTACCTCTTT GCCCCTGAAG CCTGGAATAA CTAA
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Protein sequence | MTSPQSNHRV LLVEDDVRLA NLIVDYLKSH GMHVEVERRG DTVLTRLINY KPDIILLDIM LPGMDGLTLC EKLPDYFAGP ILLMSALGSS EDQIKGLELG ADDYVVKPVD PALLVARINN LLRRQNQPPQ AESHCLTFGK LSIDPHTHAI RLNETEIDLT SHEFELLWLL ASQAGQVLSR QYIYQLLLNI DFDGKDRKID VRISRLRKKL NDNIETPFRI KTVWGQGYLF APEAWNN
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