| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_3199 |
|---|
| Symbol | |
|---|
| ID | 7085812 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | - |
|---|
| Start bp | 3792998 |
|---|
| End bp | 3793411 |
|---|
| Gene Length | 414 bp |
|---|
| Protein Length | 137 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 643462083 |
|---|
| Product | rare lipoprotein A |
|---|
| Protein accession | YP_002359107 |
|---|
| Protein GI | 217974356 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0797] Lipoproteins |
|---|
| TIGRFAM ID | [TIGR00413] rare lipoprotein A |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.476215 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAATGCAC TTCAAAACCT AATTAGGCCG TTCAATTTCG TCAAACTATC GGTACTGGCA
TTGTTAAGTT TTTTGGCTGG CTGTTCTTCA ATGCAGACGG GTGAAAATGG TAACTGGGTG
GGATTCACTG AAGCTGGTCA GGCTTCCTTT TATGGGGATA AACATCAAAA TAAGCAGACG
GCTAGTGGTG AACTTTACAA ACATAAATTA AAGACGGCAG CGCATAAAAA GTTACCCTTT
GGTTCGAGCG TTAAGGTCAC CAATGTTGAT AATGGCAAAA GTGTGATTGT AAAAATCAAT
GATAGAGGGC CTTTCGTGCG TGGCCGCATT ATAGATCTGT CTAAATCGGC GTTCAGTAGC
ATAGGCAACA CTTCCTCTGG TTTGATTGAC GTGAAAATAG AAGTGATTAA GTAG
|
|---|
| Protein sequence | MNALQNLIRP FNFVKLSVLA LLSFLAGCSS MQTGENGNWV GFTEAGQASF YGDKHQNKQT
ASGELYKHKL KTAAHKKLPF GSSVKVTNVD NGKSVIVKIN DRGPFVRGRI IDLSKSAFSS
IGNTSSGLID VKIEVIK
|
|---|
| |