Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_3186 |
Symbol | |
ID | 7085799 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | - |
Start bp | 3777326 |
End bp | 3778603 |
Gene Length | 1278 bp |
Protein Length | 425 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 643462070 |
Product | 4-aminobutyrate aminotransferase |
Protein accession | YP_002359094 |
Protein GI | 217974343 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0160] 4-aminobutyrate aminotransferase and related aminotransferases |
TIGRFAM ID | [TIGR00700] 4-aminobutyrate aminotransferase, prokaryotic type |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.365354 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.0629171 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAACAA CCAATGATTC ATTGATGGCA CGTCGCCAAG CCGCAGTTGC GGGTGGTGTC GGGCAAATTC ACCCGATCTT TACCGCGCGC GCCGAAAACG CGATCGTGTG GGATGTTGAA GGGCGCGAGT TTATCGATTT TGCGGGCGGC ATTGCTGTGC TCAATACCGG CCACCTTCAC CCTAAAGTGA AGGCGGCGGT TGCGGCTCAG CTGGATAATT TCTCTCACAC TTGTTTTATG GTGCTCGGTT ACGAGAGTTA TATCCAAGTG TGTGAAAAGC TCAATCAACT GGTGCCAGGG GATTTTGCCA AGAAGACGGC ATTATTCACT AGTGGTTCAG AAGCGGTTGA AAACGCAGTT AAAGTGGCGC GTGCCTATAC CAAACGTGCT GGCGTGATTG CGTTTACGTC TGGCTACCAT GGTCGCACTA TCGCAGCCTT AGCACTGACC GGTAAAGTCG CGCCTTACAG TAAAGGTATG GGGCTGATGT CGGCGAATGT GTTCCGCGCT GAGTTCCCGT GCGAGATGCA CGGCGTGTCC GATGATGATG CTATGGCTTC GATTGAACGT ATTTTTAAAA ATGATGCCGA GCCAAGTGAT ATTGCCGCCA TTATTTTAGA GCCAGTACAG GGCGAGGGTG GTTTCTACGC CGCATCACCT GCTTTTATGC AGCGGTTGCG GGCATTGTGT GATCGTGAGG GCATTATGCT GATCGCCGAT GAAGTGCAAA CGGGCGCTGG TCGTACTGGT ACCTTCTTTG CCATGGAGCA AATGGGCGTG AGTGCGGATA TCACCACTTT TGCTAAATCT ATTGCGGGTG GTTTCCCTCT TTCGGGCATT ACTGGCCGCG CGCAAGTGAT GGATGCGGTG GGGCCTGGTG GTCTTGGCGG TACGTATGGT GGCAGCCCGT TAGCGTGCGC CGCAGCGCTT GCTGTCATTG AAGTGTTTGA AGAAGAAAAG CTGTTAGACC GCGCCAATAC CATAGGTAAG CGCATTAAGT CTGCATTGAA TGTGATGCAA GTCGAGCATG CACAAATCGC CGATGTGCGT GGTTTAGGCG CGATGATCGC CATTGAATTA ATGGAAGATG GCAAGCCTGC ACCGCACTAT TGCGCGCAAG TGTTGGCTGA TGCCCGTGAC CGTGGATTGA TTTTATTATC CTGCGGCACT TACGGTAATG TGCTGCGTAT TTTGGTGCCA TTAACCGCGC CGGATGCACA AATTGATGCA GGCCTTGGTA TCCTCAAAGC CAGCTTCGAT GCCGTACTGA AAAGCTAA
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Protein sequence | MTTTNDSLMA RRQAAVAGGV GQIHPIFTAR AENAIVWDVE GREFIDFAGG IAVLNTGHLH PKVKAAVAAQ LDNFSHTCFM VLGYESYIQV CEKLNQLVPG DFAKKTALFT SGSEAVENAV KVARAYTKRA GVIAFTSGYH GRTIAALALT GKVAPYSKGM GLMSANVFRA EFPCEMHGVS DDDAMASIER IFKNDAEPSD IAAIILEPVQ GEGGFYAASP AFMQRLRALC DREGIMLIAD EVQTGAGRTG TFFAMEQMGV SADITTFAKS IAGGFPLSGI TGRAQVMDAV GPGGLGGTYG GSPLACAAAL AVIEVFEEEK LLDRANTIGK RIKSALNVMQ VEHAQIADVR GLGAMIAIEL MEDGKPAPHY CAQVLADARD RGLILLSCGT YGNVLRILVP LTAPDAQIDA GLGILKASFD AVLKS
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