Gene Sbal223_3170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_3170 
Symbol 
ID7085783 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp3750936 
End bp3753056 
Gene Length2121 bp 
Protein Length706 aa 
Translation table11 
GC content46% 
IMG OID643462054 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_002359078 
Protein GI217974327 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.942476 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCATT TGTCCATCAG TACTAAGTTG TTGTGGATTA CATCAGCATT ATTTTTATCG 
ATAGTGGCTA TTTTATCTAT TAGTTTATGG TGGACACTAT CGGCTCAAAA CGCACAATTG
TCGGATCAAG TTCAAAATAC CCTACAAACG GAAACGCGGG ATAAACTCGA AGCCCGCGCC
GGTGAATATG GTGAAATGGT CGCCGGATTT ATCAATGAAG CCTACCGAAT TCCTTTCTCT
TTTGCGGGTA TGCTTGAAAG TACTGCCGAG GAATTACCCT TAAAACGTGA CCGCTTAGAA
CTCGCAGTGG CGGCAGTGCT GAAGAAGAAT GCGCAAGTCT CTTCCATGTA TGCCCAGTTC
GAACCTAATG GTTATGATGG GCTCGACAGT GAGTTTTTGA ATGTTAATGT CAGTCACAGT
GTGGCGACAT CTGGCGCTCT AGAGGTCTAT TACACCCGTA ACGACGATGG CACTGTGGAG
CATAACCAAG TTGAAGATTC GGCAGAAAAG TACCTCACTA GCTTAAATGA GTTTGGGATC
CGTGACGCTG AATGGTATTT ATGCGGTAAA GAAACCTTAA AGCCCTGTTT AATGGAGCCG
TACTTATACG AGATCACTCC AGGCAACAAA GCATTAATGA CCTCCCTGAC TGTGCCCGTG
CTTAAACATA AGCAATTTAT CGGCATAGTC GGTGTAGATG TAAACTTGCC AGTGTTTCAA
ACCCTTATCG ATAAGTTATC CAAAAGCCTC TACGATGGAC AAGCAAAAGT CACTTTGCTG
AGTACCCGTG GTTTAGTGGT CGCGGCCAGT CATTACAGTA AAAAGGCGCG TCCATTAGCT
GAGTCGATAA ATCCAACTCT CGCCTCGCAA ATTATCTCGT TGCACAAGAA TTCCGGCTAC
ATGGTTAACG ATGATGAAAT TATTGTTGCC TACCCCATTA AGATCCCGCT AGCGAATGCC
GAGTGGTCCT TGGTTATCCA AGTACCGACT GCACAGGCGT ATAAAAGCTC GATTGAGCTT
AATAATGATA TGGATGAAAT GGCGACTTCC TTAGGCAGTT TGCTGCTGAT CGTGGGTATT
GTGGTATCGA TTGCCGCTGT AATTACCATT AGCTTAGTGA TCCGTAGCAT TATCTCACCA
TTGAGAATGA TCCAAGGCCG GGTAGAGCAT CTTGCGAGTG CCGATGGCGA TTTAACGCAA
TCGATTGAGG TTGATTCCCA TGCTGAATTG ATTGCGCTAG CGAAAGGTTT CAATTCCTTT
ATTTATAAAC TTAAAAATTT GATTGCCGAA CTGAAAACGC TTGCGAGCCG CTCTCAGGAG
GAAAGCCAAG CCTCTGCTAA AATTGCGCAG CTCACCCGTG ACAGCGTGAA TCGCCAGTAC
GGTGAAATTG AGAGTGTAGT AACGGCTGTG AACCAAATGA GTGCTACCGC ACTTGAGGTT
GCTAAGGCAT CAGAACAAAC GGCGGCAGAA ACTGAAGCTA TGTCGCGCAA TATTCGTCAT
AGCGAAGAGA GCCTGACTAA GGCAATGGGT TTTGTCGCGA CTATGTCTCA GGAGTCTATG
GAGGCTAAGC TGGCGGTGAG TAAAGTGGCT GAGAGCAGTA TGAACATCAG TCGTATCCTT
GAGGTAATAA GCTCCATTGC CGCACAGACT AACCTGTTGG CACTCAATGC GGCGATTGAA
GCTGCAAGGG CGGGTGAGCA GGGACGAGGC TTTGCTGTGG TGGCTGACGA AGTCCGCGCG
CTGGCATCTA AGACTCAGAG CTCGACGAAC GACATTAGTA CCCTTATCGA CGCACTGCAA
AAAGAAGTCC AAAGCGCTTC TGGCATCATA GATAAAGGTG CTGAGCGGGC ACAAATGGCC
GTAACTCAAA CTGAGCAAGC GTTAAACTCA TTAAATTCAA TGGTGAGTCA GATTGGGGAA
ATTTCGGGCC AAGTGACTCA TATTGCCGCT GCAGCAGAAG AGCAGAGTGC AGTGACTGAA
GAGGTTAATC GCAATATCAC AGGGATTTCT GACTCTGCTT CTGAACTGGC ACGTCTTGCG
GGTGAAGCAC AGCAAAGCAG TGTAGTTTTA GCAAACTTAG TGAAGCAGCA ACATGAGCAG
TTAGGTAAGT TAAAAACCTA G
 
Protein sequence
MKHLSISTKL LWITSALFLS IVAILSISLW WTLSAQNAQL SDQVQNTLQT ETRDKLEARA 
GEYGEMVAGF INEAYRIPFS FAGMLESTAE ELPLKRDRLE LAVAAVLKKN AQVSSMYAQF
EPNGYDGLDS EFLNVNVSHS VATSGALEVY YTRNDDGTVE HNQVEDSAEK YLTSLNEFGI
RDAEWYLCGK ETLKPCLMEP YLYEITPGNK ALMTSLTVPV LKHKQFIGIV GVDVNLPVFQ
TLIDKLSKSL YDGQAKVTLL STRGLVVAAS HYSKKARPLA ESINPTLASQ IISLHKNSGY
MVNDDEIIVA YPIKIPLANA EWSLVIQVPT AQAYKSSIEL NNDMDEMATS LGSLLLIVGI
VVSIAAVITI SLVIRSIISP LRMIQGRVEH LASADGDLTQ SIEVDSHAEL IALAKGFNSF
IYKLKNLIAE LKTLASRSQE ESQASAKIAQ LTRDSVNRQY GEIESVVTAV NQMSATALEV
AKASEQTAAE TEAMSRNIRH SEESLTKAMG FVATMSQESM EAKLAVSKVA ESSMNISRIL
EVISSIAAQT NLLALNAAIE AARAGEQGRG FAVVADEVRA LASKTQSSTN DISTLIDALQ
KEVQSASGII DKGAERAQMA VTQTEQALNS LNSMVSQIGE ISGQVTHIAA AAEEQSAVTE
EVNRNITGIS DSASELARLA GEAQQSSVVL ANLVKQQHEQ LGKLKT