Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_3168 |
Symbol | |
ID | 7085781 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | + |
Start bp | 3746664 |
End bp | 3748388 |
Gene Length | 1725 bp |
Protein Length | 574 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 643462052 |
Product | DNA primase |
Protein accession | YP_002359076 |
Protein GI | 217974325 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0358] DNA primase (bacterial type) |
TIGRFAM ID | [TIGR01391] DNA primase, catalytic core |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00053583 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.343709 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCAATAC CTCGTGATTT TATCAATGAG CTAATCGCTC GCACTGACAT AGTCGAACTT ATCGATCGTA AGGTGCCCTT GAAAAAGGCG GGTAAGAACT ACTCGGCCTG TTGTCCTTTT CATAGCGAAA AATCACCTTC GTTTACCGTC AGCCGTGATA AACAGTTCTA TCATTGCTTT GGCTGCGGTG CTCACGGCAA CGCCATCGAT TTTGTGATGG AGTATGACCG ACTCGATTTT ATTGATGCCA TTGAAGATTT GGCGGGCCAG CTTGGATTAG AGGTTCCCAG AGAACAAGGC ACAGGCAAGC GACATGATGA CGGTTTAAGT CGTGACTTAT ACCAACTCAT GGAAGAAGCG AGCCTTTACT TTCAAAACCA ACTTAGACAA CACCAAGATA AACAAAAAGT TATCGATTAT CTTGCCTATC GCGGTTTATC CGATGATGTA GTCGAACATT TTGGTATTGG CTTTGCGCCA GACGGTTGGG ACGGCTTATT GGGCCGCTAT CGTCAGAATC AAGATGCGCA GGATAAGTTA CTGACTGCGG GTATGTTAAT TAGCAACGAC AGTGGGAAAC GTTACGACAG ATTTCGTGAC CGCCTCATGT TTCCTATTCG CGACAGACGC GGACGAGTCA TTGGTTTTGG TGGCAGAGTT TTAGGTGATG GCACACCCAA ATACTTGAAT TCTCCAGAAA CGCCCATATT TCATAAGGGC AATGAGCTTT ATGGTCTCTA TGAACTAAAG CAACGCTATC GCGATCCTGA CAAAGTACTG ATCGTTGAAG GCTATATGGA TGTGGTGGCG TTGGCGCAAT TTGGTGTCGA TTATGCTGTC GCATCATTAG GCACCTCGAC GACGGCGGAG CAATTTCAGC TTTTGCTGCG CAGCGCTAAA GAAGTGATTT GCTGTTACGA CGGCGACAGA GCGGGTACTG AAGCGGCTTG GCGTGCCTTA GAAACGGCAT TGCCATTATT AAAGCCAGGC GATCAAGTGC GATTTATGTT CCTGCCTCAG GCCGAAGATC CTGATTCTAT GGTACGTAAG ATTGGTAAAG ATGCATTTGA AACCTTAATG GTTTCAGCCA TTGCACTACC CGAGTTTCTG TTTGATACGT TAGCGACGAA ATACGGTACA GATAAAGGCA ACTTAGCGAA ACAAGCTTTT ATCTTAATTG AAAAAATTCA AGACACTGTG CTGCAAAATT TACTGCTTGA GAGCTTAGCT CACAAGTTAG GAATGAACAG CTCAGAAGAT ATGAAAAAGA AGCTAGGCTT TAGCGTGAAA CAAGCTAAAC CAATGGCAAA TAAAGGATTA AAAGGACGCG GTACACCATT GCGACTCGCC ATCGCACTGC TAGTACAACA TCCTAAACTG GGTATGGGCT TACCCCCACA ACCCGCACTC GCCCACTTGC AGATGCCAGG CATAGAATTG CTGCCACTGT TATTGGAGAT GACTCGAGAG CAAACGTTAA ACAGCGCACA ACTACTTGAA CAATTTAGAG AGCACCCTTA CAGCGGCACT CTCCATAAAT TGGCCCAATG GGACCATCAA GTGGCGGATG AAAACTTGCT CGAAAAGTTT AAACAAACCC TGGTTTGGTT GAACAATCAA TATATTGAAC AACGATATCA GGAATTGAGT CTAAAACAGA CTCATACTAA AGAAGAGAAG ATGCAGCTCT CGAAGCTGAT CTCAGTCATG AAAGGGTTAA ACTGA
|
Protein sequence | MAIPRDFINE LIARTDIVEL IDRKVPLKKA GKNYSACCPF HSEKSPSFTV SRDKQFYHCF GCGAHGNAID FVMEYDRLDF IDAIEDLAGQ LGLEVPREQG TGKRHDDGLS RDLYQLMEEA SLYFQNQLRQ HQDKQKVIDY LAYRGLSDDV VEHFGIGFAP DGWDGLLGRY RQNQDAQDKL LTAGMLISND SGKRYDRFRD RLMFPIRDRR GRVIGFGGRV LGDGTPKYLN SPETPIFHKG NELYGLYELK QRYRDPDKVL IVEGYMDVVA LAQFGVDYAV ASLGTSTTAE QFQLLLRSAK EVICCYDGDR AGTEAAWRAL ETALPLLKPG DQVRFMFLPQ AEDPDSMVRK IGKDAFETLM VSAIALPEFL FDTLATKYGT DKGNLAKQAF ILIEKIQDTV LQNLLLESLA HKLGMNSSED MKKKLGFSVK QAKPMANKGL KGRGTPLRLA IALLVQHPKL GMGLPPQPAL AHLQMPGIEL LPLLLEMTRE QTLNSAQLLE QFREHPYSGT LHKLAQWDHQ VADENLLEKF KQTLVWLNNQ YIEQRYQELS LKQTHTKEEK MQLSKLISVM KGLN
|
| |