| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_3161 |
|---|
| Symbol | |
|---|
| ID | 7087939 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | - |
|---|
| Start bp | 3741965 |
|---|
| End bp | 3742765 |
|---|
| Gene Length | 801 bp |
|---|
| Protein Length | 266 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 643462045 |
|---|
| Product | undecaprenyl pyrophosphate phosphatase |
|---|
| Protein accession | YP_002359069 |
|---|
| Protein GI | 217974318 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1968] Uncharacterized bacitracin resistance protein |
|---|
| TIGRFAM ID | [TIGR00753] undecaprenyl-diphosphatase UppP |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.166065 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATACGT TTCAGGTCAT TATTTTAGCG CTTATTCAAG GGCTAACCGA GTTTTTACCT
ATTTCTAGTT CTGCCCACTT AATTTTACCC GCACAGCTTT TAGGCTGGGA AGATCAAGGT
TTATCCTTCG ATGTGGCGGT GAATACCGGT TCGTTATTTG CTGTGGTAAT TTATTTCAGA
CACGAGTTAT GGACTATGTT TAATGCTTGG ATTGCGAGCA TTTTCAGAGG TCAACAATCC
GAAGACAGCA AGCTGGCGTG GTGGATTATT CTGGCGACCT TGCCAGCGGT TTTTTTTGGT
TTTCTGGCGA AGGATTTTAT CGCGACTCAC CTACGTAATG CTGAGGTCAT CGCGGTCACT
ACCGTCGTAT TTGGTTTATT GTTGTGGTGG GCTGATAAGA TGTCGCGCCG CGATTTAACG
GTTTATCAGA CGGGCTGGCG TAAAGCCTTG TTAATTGGTT TCGCGCAGGC ATTGGCCTTG
ATCCCAGGGA CTTCGCGCTC TGGTGCCACT ATGACAGCGG CGCTAATGTT AGGCTTAAGT
CGTGATGCAG CGGCCCGCTT TTCATTCTTA ATGTCAGTTC CTGTGAGTTT AGGCGCGGCG
ATTTTAGTGG GTAAAGATCT GGCTAAAAGT GAGCTTCCGA TTGATTATCA AGCGTTAATC
CTAGGAACTC TGATTTCGTT TGTTGCCGCT TATGCCTGTA TTCATTACTT CTTAAAAATC
ATCAGCCGCA TGGGAATGAC CCCGTTTGTG ATCTATCGTT TAGCACTCGG TGCAGTCTTG
TGTGGATTTA TCTTCTTCTA G
|
|---|
| Protein sequence | MDTFQVIILA LIQGLTEFLP ISSSAHLILP AQLLGWEDQG LSFDVAVNTG SLFAVVIYFR
HELWTMFNAW IASIFRGQQS EDSKLAWWII LATLPAVFFG FLAKDFIATH LRNAEVIAVT
TVVFGLLLWW ADKMSRRDLT VYQTGWRKAL LIGFAQALAL IPGTSRSGAT MTAALMLGLS
RDAAARFSFL MSVPVSLGAA ILVGKDLAKS ELPIDYQALI LGTLISFVAA YACIHYFLKI
ISRMGMTPFV IYRLALGAVL CGFIFF
|
|---|
| |