Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_2996 |
Symbol | |
ID | 7089064 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | - |
Start bp | 3538409 |
End bp | 3539320 |
Gene Length | 912 bp |
Protein Length | 303 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 643461881 |
Product | DNA-binding transcriptional activator GcvA |
Protein accession | YP_002358905 |
Protein GI | 217974154 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.174451 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00000205749 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCCAGAC GATTACCACC GCTTAATGCG GTTAAAGCAT TTGAGGCAGC CGCGCGGCAT TTGAGCTTTA CGCGCGCCGC AGAAGAATTG TTTGTTACGC AGGCTGCGGT GAGCCATCAA ATAAAGGCAT TAGAAGATTT CCTCGGATTA AAATTATTTC GCCGAAAGAA CCGCTCTTTG CTTTTAACTG AAGAAGGGCA GAGCTACTTC CTCGACATCA AAGACATCTT TATTCAACTC GCCGATGCTA CCGACCGATT ACTCGCCCGC AGCGCGATTG GTTCGCTAAC GGTCAGTATG TCGCCCAGTT TTGCAATTCA ATGGTTAGTG CCGCGTTTGG CAAAGTTCAG TGAGAAAAAT CCCGATATCG ACGTGCGTAT TAAAGCCGTC GATACCGAAG CGAGCTCATT AACCGATGAT GTGGATGTCG CCATTTATTA TGGTCTAGGC AATTGGCCTG GACTGCGTGC CGATAAGCTC AGAAACGAAG TGCTCATTCC TGTGTGTTCG CCCATGTTGC TCAACGGTCC TAAGCCGTTG TCAAAACCGA GCGATTTAAA ATATCACACG CTATTACATG ATATGAATCG TCACGATTGG CAGGCGTGGT TTAGACAATG TGGGATTAAC GATATTAATG TGAACCAAGG CCCCATCTTC AGTCATTCGT CCTTGGTATT GCAGGCGGCG GCCCACGGTC AAGGCGTAGC TTTAGGTTAC AGCGTACTGG CGCGTCCCGA TATAAAAGCG GGGCGTCTTG TGTGCCCATT TCAAGAAGTC TTGGTCAGTA AAGATGCTTA CTACTTGGTT TGCCAGCAGA ATCACGCTGA ACTTGGTAAG GTCGTCGCGT TTCGCGAATG GATGTTAGAT ATGTTTGCTG AGGAGTCGCG CAGTGAGTTG TTGCCCGGAT AA
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Protein sequence | MSRRLPPLNA VKAFEAAARH LSFTRAAEEL FVTQAAVSHQ IKALEDFLGL KLFRRKNRSL LLTEEGQSYF LDIKDIFIQL ADATDRLLAR SAIGSLTVSM SPSFAIQWLV PRLAKFSEKN PDIDVRIKAV DTEASSLTDD VDVAIYYGLG NWPGLRADKL RNEVLIPVCS PMLLNGPKPL SKPSDLKYHT LLHDMNRHDW QAWFRQCGIN DINVNQGPIF SHSSLVLQAA AHGQGVALGY SVLARPDIKA GRLVCPFQEV LVSKDAYYLV CQQNHAELGK VVAFREWMLD MFAEESRSEL LPG
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