Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_2893 |
Symbol | |
ID | 7089462 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | - |
Start bp | 3401452 |
End bp | 3401958 |
Gene Length | 507 bp |
Protein Length | 168 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 643461778 |
Product | outer membrane chaperone Skp (OmpH) |
Protein accession | YP_002358802 |
Protein GI | 217974051 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2825] Outer membrane protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.000148222 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.601214 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGAACAAGA TGGTAAATCG CGCGCTGATG ACGTTAGTTT TGTTAGGCGC GCCGTTAATG GCACATGCTG AGAAAATTGC CGTAGTGGAT ATGGGCGCTG TGTTCGAACA GCTGCCACAA CGTGAACAGA TCTCTCAATC TCTGAAGAAA GAGTTTGGCG ATCGCATGGC TGATGTCCAA AAAATGCAAG AAGAAATGCG CTCTCTAATG GAGAAGCAGC AACGTGACGG TGCGTTAATG AACGATGCAC AAAAAACGGA ACTGGTTCGT AAAATGGAAT CGCTAAAATC TGAATATCAG TTAAAAGGCA AAGCATTGGA TGAAGACTTA CGTCGTCGCC AAGGTGAAGA GCAAAATAAA CTGTTAGTTA AAGTGCAAAA AGCCATCAAC ACTATCGCTG AAAAAGACCA ATATGATTTG GTATTACAAC GTGGTGCAGT CATTTATGTT AAGCCTAACG CTGACATCAG TGGCAAAGTG GTTGAAGCCT TAAGCAAAGG CAAGTAA
|
Protein sequence | MNKMVNRALM TLVLLGAPLM AHAEKIAVVD MGAVFEQLPQ REQISQSLKK EFGDRMADVQ KMQEEMRSLM EKQQRDGALM NDAQKTELVR KMESLKSEYQ LKGKALDEDL RRRQGEEQNK LLVKVQKAIN TIAEKDQYDL VLQRGAVIYV KPNADISGKV VEALSKGK
|
| |