| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_2892 |
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| Symbol | lpxD |
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| ID | 7089461 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011663 |
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| Strand | - |
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| Start bp | 3400423 |
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| End bp | 3401448 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 643461777 |
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| Product | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
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| Protein accession | YP_002358801 |
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| Protein GI | 217974050 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1044] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
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| TIGRFAM ID | [TIGR01853] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000000979976 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.694988 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAATAGTG TGACTTTAAA AGAGCTAGGC CTGTTACTAG ACGGTGATAT TCAAGGCGAC
GAAACGCTAA TTATTAATAG TGTGGCGACC TTAGAACATG CCAAAGCAGG TCAAATCTCT
TTTTTAGCCA ACAGTAAATA TCGCTCTCAG CTTGAGGCAA CTCAAGCGAG TGCGGTGTTA
TTGTCAGCTA AAGATGCGCA GGATTATCAA GGTACTGCGT TAATTGTAAA AGATCCTTAT
GTCGGTTTTG CCCGTGTTGC CCAGTATTTG GACACTACGC CTAAAGCGGC GGTGGGTATC
CATCCTTCGG CTCAAATTGA CGCTTCTGCC CATATAGGTG AAGGTGTTGC GATTGGGGCG
AATGCGGTTA TTGGTGCGAA CGTCATTTTA GGTGAAAATG TCCAGATAGG TGCCGGTGTA
GTGCTCGGAC AAGATGTGGT TATTGGCTCA AAAACGCGTT TGTGGGCTAA TGTCACTGTC
TATCACGATG TGCATTTAGG ACAAGATTGT ATTATCCATT CGGGCGCTGT ATTAGGCTCC
GATGGTTTTG GTTATGCCAA TGAACGCGGT CAGTGGATTA AAATCCCACA AACGGGCGGA
GTTCGTATCG GCGATCGGGT TGAAATAGGT GCTAATTCAA CGGTAGATCG CGGTGCATTA
GGCCATACCG AGATCCACGA TGGGGTGATT ATCGATAACC AAGTACAAAT TGCCCATAAC
GATATTATCG GTGAGAATAC CGCTATCGCA GGCAGTACGA CTGTCGCAGG CAGTGTCACC
ATAGGTAAAT ATTGTATTAT TGGTGGTAGT TGTGCCATCG CAGGTCATTT GAGCATTGCC
GATGGTGTGC ATGTGTCTGG TGGGACTAAC ATTACCAGTA CTATGCGTGA GCCTGGTTTA
TACTCTTCTG CCACTGTGGC AATGGACAAT AAACTTTGGC GTAAAAACAC AGTTCGTTTC
CGTCAGTTAG ATGAACTGTT CCATCGTGTT AAAACGTTGG AAAAAAATTT AAAAACACCA
GATTAA
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| Protein sequence | MNSVTLKELG LLLDGDIQGD ETLIINSVAT LEHAKAGQIS FLANSKYRSQ LEATQASAVL
LSAKDAQDYQ GTALIVKDPY VGFARVAQYL DTTPKAAVGI HPSAQIDASA HIGEGVAIGA
NAVIGANVIL GENVQIGAGV VLGQDVVIGS KTRLWANVTV YHDVHLGQDC IIHSGAVLGS
DGFGYANERG QWIKIPQTGG VRIGDRVEIG ANSTVDRGAL GHTEIHDGVI IDNQVQIAHN
DIIGENTAIA GSTTVAGSVT IGKYCIIGGS CAIAGHLSIA DGVHVSGGTN ITSTMREPGL
YSSATVAMDN KLWRKNTVRF RQLDELFHRV KTLEKNLKTP D
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