Gene Sbal223_2884 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_2884 
Symbol 
ID7089453 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp3388741 
End bp3390687 
Gene Length1947 bp 
Protein Length648 aa 
Translation table11 
GC content48% 
IMG OID643461769 
Productpotassium efflux system protein 
Protein accessionYP_002358793 
Protein GI217974042 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0475] Kef-type K+ transport systems, membrane components
[COG0569] K+ transport systems, NAD-binding component 
TIGRFAM ID[TIGR00932] transporter, monovalent cation:proton antiporter-2 (CPA2) family 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.76121 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0157932 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACATA GCTTCTTAAT CCAAGTACTA CTTATGTTAG TGATTGCCAT TGTGGCTATT 
GCTGTGCTGC GCCGTTTGGG CTTACCCGCA ATTCTGGCTT ATTTACTCAC TGGTGTAGTG
AGTGGACCGA GCGGTTTTCA TTGGTTTACC CAGCATCAAA TGCAATCTGT CGCTGAACTT
GGGGTTGTGC TACTGATGTT TACCTTAGGC TTAGAGTTCT CCGTGCCGCG GCTGTGGGCC
ATGCGCCGTA CCGTATTTGG CTTAGGCAGT GCACAGATGG TGATAACGAC CCTGTTGACT
ATGGGCGTGG CCCTGTTGTG TGGTCTTAAT TGGGTCGAAG CCTTAGTTAT CGGAGCTGCC
ATTGCTTTAT CATCTACAGC CATCGTCCTA AAATTACTCA ATGAACAGGG GTGGTTGCGT
CGTCGTCATG GTGAGCTATC CGTCAGTGTC TTATTATTCC AAGATTTAGC GGTGGTGCCG
CTGTTGATCC TATTACCATT ACTGGCCAAT GGCGGCGAAC CTTTGATGGT CGCGGATATC
GCCTTTGCCT TGCTCAAAGG TATTTTGGCC TTTTTCCTCT TGATGGCTTT TGGTAAATGG
GCACTGCCGC GGATTTTTGA CGAAGTTGCC CGCTCCCGCT CTAACGAACT CTTCGTGTTA
TCAACACTGG TGGTGGCTTT AGTGACAGGC GCATTTACCC AATGGCTGGG TTTATCTATG
GCGTTGGGGG CATTTATGGC GGGTATGCTA CTAGGGGAAA GCCAGTACCG TCGCCAACTT
GAGGCGGATA TCCGGCCGTT TCGCGATCTA TTGATGGGGC TGTTTTTCAT CTCCATCGGC
ATGATGCTCG ACTTTACCTT AGTGATGCGT TTCTGGTGGC AGATATTGTT GATCTTAGTG
GCCGTTGTAC TAGGTAAGGC GCTGATCATT CATGGGATCT TAAGATTGGT TGGCGAACCC
TTTCGGATTG CCATGAGCAC CGCCATGAGC CTAGCCCAAG TGGGCGAATT TAGTTTTGTG
GTGTTGGCTT TAGCGGTTAA CTATCAACTT CTAGATAATG AAATCAGTAC CATGTTAGTC
ATGGTCGCCG TGCTTTCCAT GACGATAGCC CCGTGGTTAG TTCGCCATAG CGTGGATATT
GCTAAGTGGG TGTTAGGAAT AAGGCAGGCA AAACATGTGG ATGAAGCTGT GCCACTCTTG
ATGGATGAGC ATGATCTGGT GATGATTTTT GGTTACGGCC GAGTAGGGCA GACCATCGCC
CGTTTTTTGA AAACCGAAGC TGTACCTTAT CTGGTCATGG ATCTCGATCC GACTCGTGTC
TCTGAGGCGC GTCGTGCCGG CGAACCTATT TACTTCGGGG ATGTGTGTAA ACGGGCGATG
TTAAAACAAA TAGGCGTTAA GCAGGCTAAG ATGATCGTCA TCACTTTTTG TGAGTCACGC
AGTTTAGAAG AAGTTCTACC CTTATGTAAG TTATTGGCGC CAGAAGCTAA AATTTTAGTC
AGAACTAAAG ACGACAGTGA TTTAGACTTA CTGAAAAAAG CCGGTGCCAA TCAAGTGATC
CCAGAATCTT TGGAAGGCAG CCTGATGTTA GTGTCACAGG TGTTACATCA ATGTGGTGTG
CCTTTGGCGC GCATTTTAAA ACGCTTGGAG TCAGAGCGGC GTAATCATTA TCAATTTTTA
CATGGCTTCT TTTCCGGTAC TGAAACCGAT TTCACCTTAG AGTCATTGCA TGCGGTGGCG
TTACCGCGTG GTGCAGATGC GATTGGTAAA ACCGTTGCTG AGATCATGTG GGAAACATTG
AGGGTGGAGT TAAGGGCGAT TCGTCGCAGT GGCGCCGAAG TGGAACATCC TGAGCAGGAC
TGGATTTTTC GTGCAGGGGA TATCTTACTG ATAGTGGGTA AACCACGAAG ACTTGAGAAA
GCGGAAGCTA AACTGCTGCA CGGCTAA
 
Protein sequence
MEHSFLIQVL LMLVIAIVAI AVLRRLGLPA ILAYLLTGVV SGPSGFHWFT QHQMQSVAEL 
GVVLLMFTLG LEFSVPRLWA MRRTVFGLGS AQMVITTLLT MGVALLCGLN WVEALVIGAA
IALSSTAIVL KLLNEQGWLR RRHGELSVSV LLFQDLAVVP LLILLPLLAN GGEPLMVADI
AFALLKGILA FFLLMAFGKW ALPRIFDEVA RSRSNELFVL STLVVALVTG AFTQWLGLSM
ALGAFMAGML LGESQYRRQL EADIRPFRDL LMGLFFISIG MMLDFTLVMR FWWQILLILV
AVVLGKALII HGILRLVGEP FRIAMSTAMS LAQVGEFSFV VLALAVNYQL LDNEISTMLV
MVAVLSMTIA PWLVRHSVDI AKWVLGIRQA KHVDEAVPLL MDEHDLVMIF GYGRVGQTIA
RFLKTEAVPY LVMDLDPTRV SEARRAGEPI YFGDVCKRAM LKQIGVKQAK MIVITFCESR
SLEEVLPLCK LLAPEAKILV RTKDDSDLDL LKKAGANQVI PESLEGSLML VSQVLHQCGV
PLARILKRLE SERRNHYQFL HGFFSGTETD FTLESLHAVA LPRGADAIGK TVAEIMWETL
RVELRAIRRS GAEVEHPEQD WIFRAGDILL IVGKPRRLEK AEAKLLHG