| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_2770 |
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| Symbol | |
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| ID | 7088519 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011663 |
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| Strand | + |
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| Start bp | 3256505 |
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| End bp | 3257746 |
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| Gene Length | 1242 bp |
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| Protein Length | 413 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 643461657 |
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| Product | transcriptional regulator, CdaR |
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| Protein accession | YP_002358681 |
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| Protein GI | 217973930 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3835] Sugar diacid utilization regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0333515 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.000000603935 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTATCTGC TTGATTCTGC CATCGCTAAA CAGATTGTGA GTCGCACAAT GAAAATCATT
GGCCACAATA TCAATGTGAT GAACGGCCAA GGAGTGATTT TAGGCTCAGG CGATCCTAAA
CGTATTGGTT CAACCCACGA AGGCGCGCTG CTGGCAATTG CCCAAAATCG CAATGTGGAG
ATAAGCCAAG AAGTGGCCTC TGGGTTACAT GGCGTTAAAC CTGGCATCAA TTTACCCTTG
CATTATCAAG GACAAATCAT AGGTGTTGTC GGCATTACTG GCGATCCAAG TGAACTTACC
CATTACGGTG AATTACTCAA AATGACCGCC GAAATGATTG TCGAACAAGC CAACCTGCAG
GATAAATTGC AGTGGGAGAA TCGCCAGCGC GAAGAGTTTA TTTTGCAGCT GATCAAAGCT
GAAACCGACG ATGATGAGCA GTTGCATCGC TGGGCAAAAC AGTTAGAAAT TAATATCAGC
CTGCCACGGG TCGCGGCCAT TATTGAGATC AGCGAGAAAC ACACCCAAAA ACAACATTTA
AAGACTGACG CCAACTCATC GGCCTTGTAC TTAGCAGAAG CTTCCGCTCA GTCCGCCGAT
GAACGCAGCC CCAGAGTCAG TGAAACCCTC AAGCAAGTGC TGCATCTATT GCAATACCCT
GACCGTGGCA ACTTGATTGC CATGACCTCA ATGTCGCAAT TGGTGATCCT AAAGCCCGCT
TTTTTAGATG GTAAACAATG GGATCCTGAG CTTGAAAATC AACGCATCGA CAAGCTGTTA
CAACGCTTAC CCGCCCAAAT GGATTTAAAC TTTAAAATTG CCTTGGGCAA CTTTTTCCCT
GAAAAAGGCG GTATTGCGCG CTCCTATCAA ACCGCGCAGG AAACCTTAGC CCTAGGTAAA
CAGCGCAATG CAGAGGGTAA TAAATACCTG TTCGAAGATT ATTCCCTGCA AGTACTACTT
GCGGGACTTA AACATGACTG GCGTGGTCAG GCACTAGCGT CACCCTATCA GCAACTCGCC
AAGGCCGATA AAAACGGCCA GTTACGCAAA ACCTTAGCCG CCTATATCAC CCACTTTGGT
GATGCACAGC AATGTGCGAA TGCGCTGTTT ATACACCGCA ACACACTTAG ATATCGCCTC
GATAAAATTC AGCAAATCAC CCAAGCCGAT ATTCAATCCC TGCATGGATT ATTGAGCCTG
TATCTTGGAC AACTGCTTGA TACTTCGGCA ACCCCAAGAT AA
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| Protein sequence | MYLLDSAIAK QIVSRTMKII GHNINVMNGQ GVILGSGDPK RIGSTHEGAL LAIAQNRNVE
ISQEVASGLH GVKPGINLPL HYQGQIIGVV GITGDPSELT HYGELLKMTA EMIVEQANLQ
DKLQWENRQR EEFILQLIKA ETDDDEQLHR WAKQLEINIS LPRVAAIIEI SEKHTQKQHL
KTDANSSALY LAEASAQSAD ERSPRVSETL KQVLHLLQYP DRGNLIAMTS MSQLVILKPA
FLDGKQWDPE LENQRIDKLL QRLPAQMDLN FKIALGNFFP EKGGIARSYQ TAQETLALGK
QRNAEGNKYL FEDYSLQVLL AGLKHDWRGQ ALASPYQQLA KADKNGQLRK TLAAYITHFG
DAQQCANALF IHRNTLRYRL DKIQQITQAD IQSLHGLLSL YLGQLLDTSA TPR
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