Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_2685 |
Symbol | |
ID | 7089970 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | + |
Start bp | 3152738 |
End bp | 3153448 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 643461574 |
Product | putative two-component response-regulatory protein YehT |
Protein accession | YP_002358598 |
Protein GI | 217973847 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG3279] Response regulator of the LytR/AlgR family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0538398 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.000367908 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGATCACTT GTTTAATTGT CGATGATGAA CTGTTTGCTC GTGAAGAATT AGCCGATCTT TTGGGGCAAG AACACGACAT TGAAATTGTT GGTCAATGCG CTAATGCCAT CGAGGCGTTG CAAAGCATAG CCAAAGAAAA ACCTCAGTTA ATTTTTCTCG ATATCCAAAT GCCGCGCATT TCGGGCATGG AACTTATCGC TATGCTCGAC CCCGATAACA TGCCAAAAAT TGTGTTTGTT ACCGCTTACG ACGAATTTGC CGTCAAGGCC TTCGACAACC ATGCCTTCGA TTATTTGCTC AAACCGATAG ATGCCGAGAG ACTCAGTAAA ACCCTCACTC GGGTGCGTAA AAATCTGACG CCTCAAATTA TGGATCCCAT TACCCCAAAG CGTCTGGAAC ATATTCCCTG TTACAGCGGC AATAAACTCA AGGTGATTGC AATCCAAGAT GTGGAATATG TGTTCAGTGA TTTGAGCGGC ATCCATGTGG CCAGTACGAA AGGCAAAGTC CATACCCAAT TGACCTTAAA AGTGTTTGAA GAAAAAACCC CACTGGTGCG CTGCCATCGG CAGTATTTGA TTTCACCTAA GGCGATTGCC GAAATTGAGC TGTTAGACAC GGGCGCCGAA GTCACCACCC ATTCGGGGGA TAAAGTGCCC GTATCACGGC GTTATCTTAA GAGCCTTAAA CAGCTGTTCG GCTTCCAATA A
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Protein sequence | MITCLIVDDE LFAREELADL LGQEHDIEIV GQCANAIEAL QSIAKEKPQL IFLDIQMPRI SGMELIAMLD PDNMPKIVFV TAYDEFAVKA FDNHAFDYLL KPIDAERLSK TLTRVRKNLT PQIMDPITPK RLEHIPCYSG NKLKVIAIQD VEYVFSDLSG IHVASTKGKV HTQLTLKVFE EKTPLVRCHR QYLISPKAIA EIELLDTGAE VTTHSGDKVP VSRRYLKSLK QLFGFQ
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