Gene Sbal223_2547 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_2547 
Symbol 
ID7086113 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp3032203 
End bp3033522 
Gene Length1320 bp 
Protein Length439 aa 
Translation table11 
GC content49% 
IMG OID643461440 
ProductNa+/H+ antiporter NhaC 
Protein accessionYP_002358464 
Protein GI217973713 
COG category[R] General function prediction only 
COG ID[COG2056] Predicted permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000475833 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000305197 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAATGCAG TCGTTATTGC AGTGTGCTTA ATGTTGGCAC TCAGTTTAGC TAGGGTGAAT 
GTAGTTATCG CCCTCACCGT GAGCGCCCTT GTGGCGGGAC TTGTGGGCGG AATGGATCTG
CACCAAACCA TAGATGCCTT TAATACAGGC TTAGGTGGCG GCGCGCAAAT TGCGCTCAGT
TATGCATTAT TAGGTGCCTT TGCTGTCGCA CTCTCGCACT CTGGCTTAAC CACGCTGATC
TCAAGAAGCA TCATCAGTAG TCTTGGGCAA GATCCTAATC CCACCAACAC TAACTGGGTT
CGCTGGTTAC TGCTGTTATC GCTACTTGTC ATGTCGATGG CCTCGCAGAA TATTTTACCT
ATTCATATCG CCTTCATTCC GATTTTAGTG CCACCACTGT TACATGTGAT GACCAAGCTG
AATATCGACC GTCGTTTAGT TGCTTGTGTT TTGACCTTCG GTCTGGTCAC AACCTATATG
ATTTTACCGA TTGGATTTGG TGGCATTTTC TTAAATGACA TTCTGCTTTC CAACTTAACC
AGTAATGGCT TAGCGGCTGT ACGTGAGCAA ATTCCACCAG CCATGTTAAT TCCAGCGGCA
GGCATGATAG TCGGGTTACT GACAGCTGTG TTTATCAGTT ACCGTAAACC TAGGATCTAC
GATGAAGCCA AAGTATTGGT TGCAGAGCCA GAAGAAACCC TCAACAAACG CAATATTATC
ATTGCCGCAG TGGCGATATT AGCCACCTTA GTGGTGCAAC TTGAAACCGA TTCGATGATT
TTTGGCGCCT TAGTCGGCTT CATGATTTTC AGTTTCTCGG GCGCCTTAAA GCATGTCGCC
GACCAAGATA TTTTCAATCA AGGCGTGCGC ATGATGGCCA ACATCGGTTT TATCATGATT
TCAGCCGCTG GTTTTGCCGC CGTAGTGAAA GAAACCGGTG AAGTGGGCAC GCTTGTGGCT
TCGCTTAGCG ACATCATTGG TGATAATAAA GCCCTCGCCG CATTTTTAAT GCTGCTAGTT
GGTCTACTGA TCACTATGGG GATCGGCTCG TCTTTCTCCA CCATTCCGAT TATCGCGACC
ATTTATGTGC CTTTGGCGTT AAGTTTTGGT TTTTCGGTGG CGGCGACAAT CGCTTTAGTC
GGCACCGCCG CAGCGCTGGG CGATGCGGGC TCGCCAGCAT CGGATTCCAC CTTAGGTCCT
ACTGCGGGTT TGAATGCCGA TGGGCAACAC GACCACATTC GTGACAGCGT GATCCCCACC
TTCATCCACT ACAATATCCC ACTGTTAGTG TTTGGCTGGA TTGCGGCCAT GGTGTTGTAA
 
Protein sequence
MNAVVIAVCL MLALSLARVN VVIALTVSAL VAGLVGGMDL HQTIDAFNTG LGGGAQIALS 
YALLGAFAVA LSHSGLTTLI SRSIISSLGQ DPNPTNTNWV RWLLLLSLLV MSMASQNILP
IHIAFIPILV PPLLHVMTKL NIDRRLVACV LTFGLVTTYM ILPIGFGGIF LNDILLSNLT
SNGLAAVREQ IPPAMLIPAA GMIVGLLTAV FISYRKPRIY DEAKVLVAEP EETLNKRNII
IAAVAILATL VVQLETDSMI FGALVGFMIF SFSGALKHVA DQDIFNQGVR MMANIGFIMI
SAAGFAAVVK ETGEVGTLVA SLSDIIGDNK ALAAFLMLLV GLLITMGIGS SFSTIPIIAT
IYVPLALSFG FSVAATIALV GTAAALGDAG SPASDSTLGP TAGLNADGQH DHIRDSVIPT
FIHYNIPLLV FGWIAAMVL