Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_2545 |
Symbol | |
ID | 7086111 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | + |
Start bp | 3030437 |
End bp | 3031108 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 643461438 |
Product | ribonuclease T |
Protein accession | YP_002358462 |
Protein GI | 217973711 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases |
TIGRFAM ID | [TIGR01298] ribonuclease T |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000000125683 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.0000000175262 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGTGACA TTTGCGACGC GAACAAATTG AAATACCGAT TTCGAGGCTA CTTTCCCGTA GTCATTGATG TCGAAACTGC GGGCTTCAAC TCTCAAACCG ATGCGTTGCT AGAAATTGCC GTCACCCTAC TGAAAATGGA CAATGAAGGC GTGATAGGAA TCGACAAAAC CCTACACTTC CACATTGAGC CCTTTGAAGG CGCAAATTTA GAACCCGAAG CGTTAGCATT CAACGGTATT GATCCCACTA ATCCGTTACG CGGAGCCGTG AGCGAGAAAG AAGCCTTTTT AGAAATCTTT AAAGCGGTGA AAAAAGCCCA AAAAGCCTCT GACTGCCATC GCAGTATCAT AGTGGCGCAT AATGCCGCCT TTGATCATGG TTTTGTGAGT AAGGCGATTG AACGTTGCGA CTTAAAACGC TCGCCGTTTC ATCCTTTTGC TACTTTCGAT ACTGCTACAC TCGCCGGACT TGCCATTGGT CATACCGTAC TTGCCAAAGC ATGCATCATG GCGGGCATTC CCTTCGATAA TAAAGAAGCC CATTCTGCGC TATATGATAC CGAACGTACC GCAGAGCTTT TTTGTCACAT AGTGAATCGT TGGAAATCAT TAGGCGGCTG GCCGTTACTG GCCGTGGATG AGCAGGATGC ACAAAGCGAC ACTGAGGCAT AA
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Protein sequence | MSDICDANKL KYRFRGYFPV VIDVETAGFN SQTDALLEIA VTLLKMDNEG VIGIDKTLHF HIEPFEGANL EPEALAFNGI DPTNPLRGAV SEKEAFLEIF KAVKKAQKAS DCHRSIIVAH NAAFDHGFVS KAIERCDLKR SPFHPFATFD TATLAGLAIG HTVLAKACIM AGIPFDNKEA HSALYDTERT AELFCHIVNR WKSLGGWPLL AVDEQDAQSD TEA
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