| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_2542 |
|---|
| Symbol | |
|---|
| ID | 7086108 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | - |
|---|
| Start bp | 3025856 |
|---|
| End bp | 3026257 |
|---|
| Gene Length | 402 bp |
|---|
| Protein Length | 133 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 643461435 |
|---|
| Product | tol-pal system-associated acyl-CoA thioesterase |
|---|
| Protein accession | YP_002358459 |
|---|
| Protein GI | 217973708 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0824] Predicted thioesterase |
|---|
| TIGRFAM ID | [TIGR00051] acyl-CoA thioester hydrolase, YbgC/YbaW family
[TIGR02799] tol-pal system-associated acyl-CoA thioesterase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.00000475401 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.00000263931 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGATGTTTC TTTGGCCTAT TTCAGTCTAT TACGAAGACA CCGACGCTGG CGGCGTTGTC
TATCATTCGA ACTATCTCAA CTTTTTTGAG CGGGCGAGAA CCGAGTGGCT AAAAGCCCTT
GGCGTGAGTC AGACTGCGCT TTTAGCCGAC GATACCGCCT TTGTGGTAAA GCGTGCGGAA
TTAGATTTTC GCAAAGCGGC ACGTTTTGAA CAGAACCTTA TTGTTGAAAC TAAGGTCATA
GAGTTGAAAA AGGCCTCGTT GATCTTTCAT CAACGCTTGG TCGATAAACA GGGAGACTGT
TATTGTGAAG GCACAGTGCT GGTTGTTTGT GTTGCGCTGT CACGAATGCG TCCCCGAGCT
ATTCCCTTAA ATATTGTGCA GGAGTTTGAC AGTGCAAGCT GA
|
|---|
| Protein sequence | MMFLWPISVY YEDTDAGGVV YHSNYLNFFE RARTEWLKAL GVSQTALLAD DTAFVVKRAE
LDFRKAARFE QNLIVETKVI ELKKASLIFH QRLVDKQGDC YCEGTVLVVC VALSRMRPRA
IPLNIVQEFD SAS
|
|---|
| |