| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_2498 |
|---|
| Symbol | |
|---|
| ID | 7087034 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | + |
|---|
| Start bp | 2971990 |
|---|
| End bp | 2973945 |
|---|
| Gene Length | 1956 bp |
|---|
| Protein Length | 651 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 643461391 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002358415 |
|---|
| Protein GI | 217973664 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.305411 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGGATAT CGATGCCACT GAAGCTTTTA GGATTAATGG CCTGCTCAAG CCTACTCATG
GCGTGCGGAG GCGGTGGAGA CAGCAACACA GATAATGGCG GAGTAACGCC CCCCTCCACC
TCACTGCCAC GCTGCACAGA TAGCATTTCG CCGCTTCTTG TTACTACATC ATCCTCAATC
CGTTTTCAAA CTGAACCGAC TTATGTGGCA GGTCAATCCA GTGCCATCAT TGCCAACATC
CTTAATCGCG ATAGCCAAAA CTTAACCTTT CGCTGGCAGC AAATCGATGG GCCGAACATA
CAGTTAGTCA GTCAAAACAG CCCGGTATTA GCCTTTGATA CTCCCACCGC AGGCGGCTAC
CGTTTTAGCT TGCATGTCAC GGGAAGTAAT CTAGATGTCA GCGGAGAAAT CGGCATTAAT
GTCGATCCCG CATCGACGGG CGTACTGAAC GTCCGCCAAG ATCACCAAGT GGTTGAAGGT
AACAATGTTA GCTTAAGGCT TGGACAACAA TCGGGATTAA GCGCAGCGAA TATCTCTTGG
TGCGTGGCGT CTGGCCCAGA TTTAATGGTC GATTTGAGCG ACCCATTTAG ACCTTTATTT
ACCGCGCCAT CAGTCGCCCA AGATACAATC ACTCGGCTCA AAGTGAACGC CAGCATTAAC
GGTAACTCAC TCAGTGATGA TGCCTTTGTG CTAACAACCG CGGCGCCGGC GATCAGCTCG
CAATATTTCG ATACTCCAGT GGCGCGCACT CACGCCTATC GTCCAGCCTC GCCTTACGCT
AATGTACTAG CGGGCTGTGT TTACTCTAAT CAGCTTAATG ATAGTTGCAC TATCAATACC
TTACCTTTGA TAGGACAAAC CTCAAGCGAT CTAAATCGTG AGACAATTCT AAATCGTGTA
CTGGTTTCCC ACGACTGGAT GGGCGATAAC TTTGCCGCCT TTTTAGCTCA GATGGACCCC
AACAGCGATT TTGCTCGCCT GTTACAATCC GTCACGGCCG TGGTGATTAG CTATGATGTG
CGCCCTTCCT TCTATTGGGT AGTTACAGGA GCGATTTATC TCGATCCCGA CGATTTATGG
CTTACGCCAA GCCAGCGTGA CACCATTAAT GAAGCGCCAG ATTACCGCAG TAATTTCGGT
GATGATCTTA ACTTTGTGAT GCCTTGGCGT TATGTGAAAA ACAATCAATA TGCGTCACTT
GGCGTACCTA TCACCGTCAG AGCAGACCGA ACGTTAGCAC AAATCAATCC CGATCTAGCC
TCCTTGCTGT ATCACGAGCT AGCCCATGCC AATGACTTCT TCCCCCGCAG CGTACATGCC
TCACTCACAG GGCCAAGACT GCTAGATGAT TACAGTCGCC GCAATGCCAA CAAGAGCCTG
ATATCTGATC AAGTCAGCAC CAGCTATCCA CTAATGAGCA CTGAAATGAT GGGACTTGCC
AATGTCCGTT TCCTCGGCGC AGCGGCGAAT AATGTGCAAA AGGCCTATCA GCCATCGGAT
GTGAGTACAT TCTTTTCTAC CGATATCGCC AGCGACTTCT ATGCCTATTC CAGCACCCGT
GAAGACACAG CTATGCTGTT TGAAGAAGCC ATGATGAGTT ATCGCTATCA AATATTACGT
GATGTCGCCG TCACCAATAA ACCTGCGGTG TTAACCGCTG ATACGCTGGT TATTGATTGG
GGACAAAGAG GTCGAATTGC ACAAGATAGT CTAGAAAATC GCGCCGCACT GGTGATTGAT
GAAATTCTGC CAGAGCTTGA TGGCATCAGT TTGATTGAAA GCCTGCCCGA ACCGATTGCC
ATGACCCAAG GTCAAAGCTG GCGTCAAACG CTCGCCATAT CACCTGCGAA TGCGCAGCTC
AAAGGCCAAA ACAATGCACC GACAAACGAT GTGCTGCCAC GCTTTGAGCC TGAACTTCAC
TTAAGTGGCG ACCGTCACCG TCATCCTCAG CAATAG
|
|---|
| Protein sequence | MGISMPLKLL GLMACSSLLM ACGGGGDSNT DNGGVTPPST SLPRCTDSIS PLLVTTSSSI
RFQTEPTYVA GQSSAIIANI LNRDSQNLTF RWQQIDGPNI QLVSQNSPVL AFDTPTAGGY
RFSLHVTGSN LDVSGEIGIN VDPASTGVLN VRQDHQVVEG NNVSLRLGQQ SGLSAANISW
CVASGPDLMV DLSDPFRPLF TAPSVAQDTI TRLKVNASIN GNSLSDDAFV LTTAAPAISS
QYFDTPVART HAYRPASPYA NVLAGCVYSN QLNDSCTINT LPLIGQTSSD LNRETILNRV
LVSHDWMGDN FAAFLAQMDP NSDFARLLQS VTAVVISYDV RPSFYWVVTG AIYLDPDDLW
LTPSQRDTIN EAPDYRSNFG DDLNFVMPWR YVKNNQYASL GVPITVRADR TLAQINPDLA
SLLYHELAHA NDFFPRSVHA SLTGPRLLDD YSRRNANKSL ISDQVSTSYP LMSTEMMGLA
NVRFLGAAAN NVQKAYQPSD VSTFFSTDIA SDFYAYSSTR EDTAMLFEEA MMSYRYQILR
DVAVTNKPAV LTADTLVIDW GQRGRIAQDS LENRAALVID EILPELDGIS LIESLPEPIA
MTQGQSWRQT LAISPANAQL KGQNNAPTND VLPRFEPELH LSGDRHRHPQ Q
|
|---|
| |