Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_2487 |
Symbol | |
ID | 7087023 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | - |
Start bp | 2961985 |
End bp | 2962512 |
Gene Length | 528 bp |
Protein Length | 175 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 643461380 |
Product | thioesterase superfamily protein |
Protein accession | YP_002358404 |
Protein GI | 217973653 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism |
TIGRFAM ID | [TIGR00369] uncharacterized domain 1 |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.004295 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGGTAA ATTCGGATTT TTTCCCGCTG ACCCAAATGG CGCAGCGGTT TGTGGATCAA CTCGCTCAGT GTCGTCGTCT CGGTTTAACC GTATTAGAGG CGAGCGAGCA CCATGTGTTG ATTGAGTTGC CCTACAGCAC TGAATTAATT GGCTATCCCG ATACGGGGGT TATCCACGGC GGAGTCATTA CCACCTTAAT GGATACAGCC TGTGGCAGTG CTGTGGTTAG CGCGATATTC CATAAATTCA AATTGTTAGA AATCTCACCG ACGCTCGATT TGCGGGTGGA TTATATGAAG CCCGCTCAGC CCCATAAGCC TGTGTTTGGG TTCGCGGAAT GCTACAAATT GTCTTCCAAT ATTGCCTTTA CCCGCGCGAT TGCTTATCAA GACAGCATAG ATGATCCTAT TGCCCATGCT GTTGGTTCCT TTATGCGGAT CAGCCCAGAA ATGGTGGGTG ATGCCTTTAG ACAAGCGCTG ATGGGTGAAG CCGTGCCTGA GATAGGAGAC ACTGATGAGC GCAAATAA
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Protein sequence | MKVNSDFFPL TQMAQRFVDQ LAQCRRLGLT VLEASEHHVL IELPYSTELI GYPDTGVIHG GVITTLMDTA CGSAVVSAIF HKFKLLEISP TLDLRVDYMK PAQPHKPVFG FAECYKLSSN IAFTRAIAYQ DSIDDPIAHA VGSFMRISPE MVGDAFRQAL MGEAVPEIGD TDERK
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