Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_2452 |
Symbol | |
ID | 7086988 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | + |
Start bp | 2928338 |
End bp | 2929537 |
Gene Length | 1200 bp |
Protein Length | 399 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 643461345 |
Product | cystathionine beta-lyase |
Protein accession | YP_002358369 |
Protein GI | 217973618 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
TIGRFAM ID | [TIGR01324] cystathionine beta-lyase, bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAGATA AACATCATCA AGCCACCCAA ATCGTCAGCT TAGGTCGAGA CAAAAAATGG ACCAAAGGCG TGATCAATCC GCCCGTTTTT CGTGCTTCGA CTATCGTCTT CGAAACGATG GATGAAATGC GCCACGCCGC GAAAAATAAA ACCAACGGCG AGATGTTTTA TGGCCGCCGT GGTACCCCGA CCCATTTTTC GTTTCAAGCG GCGATTGCTG AATTAGAAGG CGGCGTCGGT ACAGCGCTGT ATCCCTCTGG CGCGGCGGCG ATCAGTGCGG CGTTATTGTC ATTTTTAAAA GCGGGCGATC ACCTATTGAT GGTCGATAGC GTGTATGAGC CAACGCGGGA TCTGTGTACC CATATTCTCG GCGGTTTTGG TATCGAAACC ACTTACTACG ATCCGCTGAT TGGCGCAGGT ATTCGCGACC TTATTCGCCC CAATACTAAA GTGTTGTTTT TAGAGTCTCC AGGCTCCATC ACCATGGAAG TGCAAGATGT GCCGACCTTA TGCCGCATCG CCCACGAACA TGGGCTGATT ACTATGCTGG ACAACACTTG GGCATCCCCA ATCAATAGTA AGCCCTTTGA AATGGGGATA GATATTTCGA TTCAAGCGGC GACCAAATAC ATCGTCGGTC ACTCAGATGT GATGATAGGC ACGGCCACTG CCAACGAAAA ATACTGGCCA CAATTGCGTG AACACAGCTA TTTGATGGGA CAAACCACCT CCCCTGATGA TGTGTACCTT GCCGCCCGTG GCCTGCGCAC CTTAGGCGTG CGTATGGCGC AGCATGAAAA AAATGCCCTG CAGGTTGCCA ACTGGTTGAA AACCCGACCA GAAGTCGATC ATCTGCGTCA TCCGGCGTTT GATACCTGCC CTGGCCATGA GTTCTTTAAA CGCGACTTTA GCGCCTCCAA CGGCTTGTTC TCCTTTGTAT TGAAACAAGG CGATGCCGAT GCGGTCACCG CACTGGTTGA GAATATGAGT CACTTTAAGA TGGGCTTTTC TTGGGGCGGC TACGAGAGTT TGATCCTCGG CATTTTCGGC ATTGAAAAAA TTCGCTCCGC GACTAAGTGG GATGCGAGCA AACCGTTAAT TCGTTTGCAT ATTGGTTTAG AAGATCCCGC GGATTTAATT GCCGATCTCA GCGCAGGGTT TGACCGCTTT AACGCAGTAC TGGCGGCCAA AGCTAAGTAG
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Protein sequence | MTDKHHQATQ IVSLGRDKKW TKGVINPPVF RASTIVFETM DEMRHAAKNK TNGEMFYGRR GTPTHFSFQA AIAELEGGVG TALYPSGAAA ISAALLSFLK AGDHLLMVDS VYEPTRDLCT HILGGFGIET TYYDPLIGAG IRDLIRPNTK VLFLESPGSI TMEVQDVPTL CRIAHEHGLI TMLDNTWASP INSKPFEMGI DISIQAATKY IVGHSDVMIG TATANEKYWP QLREHSYLMG QTTSPDDVYL AARGLRTLGV RMAQHEKNAL QVANWLKTRP EVDHLRHPAF DTCPGHEFFK RDFSASNGLF SFVLKQGDAD AVTALVENMS HFKMGFSWGG YESLILGIFG IEKIRSATKW DASKPLIRLH IGLEDPADLI ADLSAGFDRF NAVLAAKAK
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