Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_2450 |
Symbol | |
ID | 7086986 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | + |
Start bp | 2925223 |
End bp | 2925915 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 643461343 |
Product | two component transcriptional regulator, winged helix family |
Protein accession | YP_002358367 |
Protein GI | 217973616 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000016563 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCGTA TCGCCATAGT GGAAGATGAA GCGGCCATTC GCGAGAATTA CAAGGACGTG CTGCAACAAC ACGGTTACAG CGTGCAAACC TATGCCGACA GACCATCGGC CATGTTAGCC TTTAATACTC GTTTACCGGA TTTAGCCATT ATCGACATCG GCTTAGGCAA TGAAATTGAC GGTGGCTTTA TGCTGTGTCA GTCACTGCGT GCTATGTCGA GCACGCTGCC GATCATCTTT TTGACCGCCC GAGACAGTGA CTTTGATACT GTATGTGGCC TGCGTTTAGG CGCCGATGAT TACTTGAGTA AAGAAGTGAG TTTCCCCCAT TTAACTGCGC GCTTAGCGGC CTTGTTTCGC CGCTCCGAGC TTGCGGCCAG CCAAACGGCG CAGGAAAACC TGCTCGAACG TGGCCCGCTG ACGATTGATG CCAATCGCAT GCAAGTCTAT TGGAACCAAT TACCCATTGA GCTTACCGTC ACTGAATTTT GGATGGTGCA CGCGTTAGCC AAACACCCGG GCCATGTGCG TAGCCGCCAT GAATTGATGC AAGAGGCGAA GATTTTTGTC GATGACAGCA CGATCACTTC CCATGTGAAA CGCATTCGCA AGAAGTTCAT CGCCACCGCG CCTGAGTTTG ATTGTATTGA TACGGTTTAT GGCATGGGTT ATCGCTGGGA CAGCTTAGCC TGA
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Protein sequence | MKRIAIVEDE AAIRENYKDV LQQHGYSVQT YADRPSAMLA FNTRLPDLAI IDIGLGNEID GGFMLCQSLR AMSSTLPIIF LTARDSDFDT VCGLRLGADD YLSKEVSFPH LTARLAALFR RSELAASQTA QENLLERGPL TIDANRMQVY WNQLPIELTV TEFWMVHALA KHPGHVRSRH ELMQEAKIFV DDSTITSHVK RIRKKFIATA PEFDCIDTVY GMGYRWDSLA
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