Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_2379 |
Symbol | asnC |
ID | 7089342 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | + |
Start bp | 2840654 |
End bp | 2842054 |
Gene Length | 1401 bp |
Protein Length | 466 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 643461273 |
Product | asparaginyl-tRNA synthetase |
Protein accession | YP_002358297 |
Protein GI | 217973546 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0017] Aspartyl/asparaginyl-tRNA synthetases |
TIGRFAM ID | [TIGR00457] asparaginyl-tRNA synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000000851779 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.570909 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCATCG CATCTGTCGC ATCTGTATTT AAAGGTGAGC ACGCCGTCGG TTCTAAAGTC ACAGTTCGTG GCTGGGTCAG AACCCGTCGT GACTCTAAAG CCGGCATCTC TTTTTTAGCT GTTTATGACG GCTCTTGCTT TAATCCTATC CAAGGTGTCG TGCCCAATAG CTTAGATAAT TACGACAACG AAGTGTTAAA GCTGACTGCG GGTTGTTCTG TTGTGATGAC AGGCGACGTG GTGGAATCTC CAGGCGCAGG TCAAGCATTT GAGCTGCAAG TGACTGATAT TGAAGTCGCG GGCTGGGTTG ATGATCCAGA CACTTACCCA ATGGCCGCTA AACGTCACTC AATTGAACAT TTACGCGAAT TAGCGCACTT ACGCCCACGC ACTAACATTA TTGGTGCCGT TGCCCGCGTA CGTAACTGTT TATCCCAAGC GATTCACCGC TTCTACCACG AAGAAGGCTT TATTTGGGTA TCTACCCCAC TTATCACTGC CTCAGACTGT GAAGGCGCCG GTGAAATGTT CCGCGTATCG ACCTTAGATA TGGAAAACCT GCCACGTACT GAAGCAGGCA AAGTCGATTA CGATAAAGAT TTCTTCGGTA AAGAAGCTTT CCTAACCGTA TCTGGCCAGT TGAACGCTGA AACCTACGCC TGTGCACTGT CAAAAGTGTA TACCTTTGGC CCAACTTTCC GTGCTGAAAA CTCAAACACT AGCCGCCACT TAGCGGAATT CTGGATGGTT GAGCCTGAAG TGGCCTTCGC TAACTTAAAC GACATCGCAG GCCTCGCCGA AGCTATGTTG AAATACGCAT TTAATGCCGT ATTGACTGAG CGTATGGACG ATTTAACTTT CTTCGCCCAG CACGTTGATA AGACAGTGAT CGACCGTCTG CAATCTTTCG TTTCAAGCGA TTTTGCGCAA GTGGATTACA CAGATGCGGT TGAAATTCTG CAAAACTGTG GCAGAACCTT CGAGTTCCCA GTGTCTTGGG GTATCGACTT ATCTTCTGAG CACGAGCGTT ACTTAGCCGA AGAACACTTC AAAGCCCCTG TGGTAGTGAA GAACTATCCG AAAGATATCA AGGCCTTCTA CATGCGCTTA AACGATGACG GTAAAACCGT TGCCGCGATG GACGTGTTAG CCCCAGGTAT CGGTGAAATC ATCGGCGGTT CTCAACGTGA AGAGCGTTTA GACGTGCTGG ATATGCGTTT AGCCGAAATG GATCTGAACC AAGAAGATTA CTGGTGGTAC CGTGATATGC GCCGTTATGG CACAGTGCCA CACGCAGGTT TTGGTCTAGG GTTTGAGCGT TTAGTGTCTT ACGTGACGGG CGTTAACAAC ATTCGTGATG TTATCCCATT CCCACGTGCA CCGCGCACTG CGAACTTCTA A
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Protein sequence | MSIASVASVF KGEHAVGSKV TVRGWVRTRR DSKAGISFLA VYDGSCFNPI QGVVPNSLDN YDNEVLKLTA GCSVVMTGDV VESPGAGQAF ELQVTDIEVA GWVDDPDTYP MAAKRHSIEH LRELAHLRPR TNIIGAVARV RNCLSQAIHR FYHEEGFIWV STPLITASDC EGAGEMFRVS TLDMENLPRT EAGKVDYDKD FFGKEAFLTV SGQLNAETYA CALSKVYTFG PTFRAENSNT SRHLAEFWMV EPEVAFANLN DIAGLAEAML KYAFNAVLTE RMDDLTFFAQ HVDKTVIDRL QSFVSSDFAQ VDYTDAVEIL QNCGRTFEFP VSWGIDLSSE HERYLAEEHF KAPVVVKNYP KDIKAFYMRL NDDGKTVAAM DVLAPGIGEI IGGSQREERL DVLDMRLAEM DLNQEDYWWY RDMRRYGTVP HAGFGLGFER LVSYVTGVNN IRDVIPFPRA PRTANF
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