Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_2302 |
Symbol | |
ID | 7087716 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | + |
Start bp | 2744464 |
End bp | 2746824 |
Gene Length | 2361 bp |
Protein Length | 786 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 643461200 |
Product | alpha amylase catalytic region |
Protein accession | YP_002358224 |
Protein GI | 217973473 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0366] Glycosidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.073428 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATATTAA ACCTGCGGAC TCTCACCACT TCCTTAGTGA TTATGCTTAG CCTAGGCGCC TCTTCCAACA CAGCGCAGGC AAGTTCAAGC AGTCTCTCTT TACCACTTCA AAGCACATCA AGCCAGCCTC AAGACCTGAC ACTTGAACCC GCTTTTTGGT GGGCGGGGAT GCACAATCCT GAGTTACAGT TGATACTGTA TAGCCGCGAT TTCCCTAGCT TACCGCAGCA GCTTAAGGTT GATATCCAAG GACAAGGCAT CACGCTAAAA AGCCTTGAAC ACACTGATAA CCCTCACTAT CTGTTTATCA ATTTAGATCT GAGCCAAGCT GCGCCGCAAA CCTTTGAGCT GGTGATTTCA AGCACTGACT CGGCGTTAAA AACCAACACG CCTCTTTATC GCCTGCCCTA TACGTTGCAA GCGCGTGTTA AGGGCAGCCG TGAACGCCAA GGGTTTAGCA ATAAGGATGT GATTTACCTT ATCACCCCGG ACAGATTCGC CAATGGCGAC ACGAGCAATG ACAATCAGGC CGATATGCTA GAGCAAGTTG CGGCTAACTC TCCTAGCAAT CTTAGCAATC CCAGCACCCC CTATTATCCC GATGCTCGCC ATGGCGGCGA TATCGCCGGG ATCAGTCAGC ACTTAGCGTA TCTGGCAAAG CTCGGGGTGA CTCAGTTATG GATCAATCCA CTGCTTGAGA ATAATCAAGC CCACTATTCA TACCACGGTT ACTCGATTAC CAATTTGTAC CGCGTCGATC CCCGCTTTGG CAGCAACGAG GATTATAAAG CCTTAGTCGC TAAGGCTAAC AAGCTTGGCC TTGGGGTAAT TAAAGATGTT GTCGTGAATC ATATCGGCTC TAATCATTGG TGGCTCAACG AGTTACCTAG CCAAGACTGG CTCAATGAGT TACCTAGCCA AGACTGGCTC AATGACGCCA CAAAAACGCC GCTAAACAAT CACGAATCCA AACCTAACTT CATTCAGTCT ACCGATACCA AATCCAGCGC CATCAAATCC AGCATTACCA GTCCACGTTT CACCAGCCAT AGGCGCACCA CAGTGCAAGA TCCCTACGCG GCAGCGCAAG ATCATATCGA TTTTGTCGAC GGCTGGTTTA CCGACACTAT GCCGGATCTG AATCAAAGCA ATCCCAAACT GGCAACCTAT CTTATCCAAA ACAGTATTTG GTGGGTCGAG TACGCAGGAC TTTCAGGGAT CCGCGAAGAT ACTTATTCCT ACGCCGACAA AGAGTTTCTC GCTAAATGGT CTAAGGCCGT AATGACTGAG TACCCGAATT TTAATATTGT GGGCGAAGAA TGGACCGCAA ACCCCATCAC AGTGTCCTAT TGGCAAAAGG GCAAAATCAA TGCCGATGGC TATACCTCAG ATTTACCCAG TTTGATGGAC TTCCCGCTAT ATGAAAAATT AATTGCCAGC CTCAATGAGC CAGAAAGCTG GGACACAGGT TTTATCAAGC TTTACGAGAT GTTAGCCAAC GATGTTGTGT ATGCCGATCC CAGTAAACTA GTGCTATTTG AAGGCAATCA CGACACCAAT CGTATCTTCA GTTTAGTGAA AGAAAATATA GACTTATACA AGATGGCACT CACCTATATA CTAACCGCCA AACGCATTCC GCAGCTGTTC TACGGTACAG AAGTGTTAAT GACCAGCCCG ACAGAAGGCC GTCACGATGG TGTTGTGCGC AGTGATTTCC CCGGTGGGTT TGCCAACAGT GCCACTAACG CCTTTACCGG CCAAGGACTG AGTGAACCCC AGCGACAAGC ACAGCAATTT GTACGAACCC TACTGAATTA CCGTAAACAA TCTCCTGCGC TACAATCGGG CGATTTACTG CACTTTGTAC CGCAAGATGG TGTCTATGTG CAATTTCGTT GCGCATTAAA TGCGCCATTA TCAGCTGAAC AGAAAGCCGA GGCGCTCAAG TCACGAATAC AAAACAATTC TCTAACCCAA CACAATGCCT GCACTCAGCC CTCGGCCGAT AAAGTCATGG TGATTTACAA TAAGAATGAC AAGGCAGTCA CGCTAGATAT AAACCGCTTT GCCAGTGTAC TTGGCGATAG CGGCGCCGCT ACAGATATCA TCAGTGGCAA AACAGTTTCA CTCAATCAAG CGATAACATT GCCCCACGCA GGGGTTACTA TCCTTGAGCT TAAGCCTAAT TCTAAGACTA AGACTAAGAC TAAGACTAAG TCGCCGCAGA ATGCTGGCTT GCCGAGCCGC CAAGATTCAA TGTACCCGGG GAACCAAACT AACGCTTTAA CGCGCGCTCA TACTAACAAC AGTGCTAACA ACCTAGCCAA ACACTCAACT CGAAAAGGAA CTCAGTCTTG A
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Protein sequence | MILNLRTLTT SLVIMLSLGA SSNTAQASSS SLSLPLQSTS SQPQDLTLEP AFWWAGMHNP ELQLILYSRD FPSLPQQLKV DIQGQGITLK SLEHTDNPHY LFINLDLSQA APQTFELVIS STDSALKTNT PLYRLPYTLQ ARVKGSRERQ GFSNKDVIYL ITPDRFANGD TSNDNQADML EQVAANSPSN LSNPSTPYYP DARHGGDIAG ISQHLAYLAK LGVTQLWINP LLENNQAHYS YHGYSITNLY RVDPRFGSNE DYKALVAKAN KLGLGVIKDV VVNHIGSNHW WLNELPSQDW LNELPSQDWL NDATKTPLNN HESKPNFIQS TDTKSSAIKS SITSPRFTSH RRTTVQDPYA AAQDHIDFVD GWFTDTMPDL NQSNPKLATY LIQNSIWWVE YAGLSGIRED TYSYADKEFL AKWSKAVMTE YPNFNIVGEE WTANPITVSY WQKGKINADG YTSDLPSLMD FPLYEKLIAS LNEPESWDTG FIKLYEMLAN DVVYADPSKL VLFEGNHDTN RIFSLVKENI DLYKMALTYI LTAKRIPQLF YGTEVLMTSP TEGRHDGVVR SDFPGGFANS ATNAFTGQGL SEPQRQAQQF VRTLLNYRKQ SPALQSGDLL HFVPQDGVYV QFRCALNAPL SAEQKAEALK SRIQNNSLTQ HNACTQPSAD KVMVIYNKND KAVTLDINRF ASVLGDSGAA TDIISGKTVS LNQAITLPHA GVTILELKPN SKTKTKTKTK SPQNAGLPSR QDSMYPGNQT NALTRAHTNN SANNLAKHST RKGTQS
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