Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_2272 |
Symbol | |
ID | 7086399 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | + |
Start bp | 2697568 |
End bp | 2699472 |
Gene Length | 1905 bp |
Protein Length | 634 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 643461170 |
Product | diguanylate cyclase/phosphodiesterase |
Protein accession | YP_002358194 |
Protein GI | 217973443 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2200] FOG: EAL domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000000104677 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.665936 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCATGT CAAAATCATA TCCAATTTTT TTACTGCTTA TTTTCTTAGG TCTCTTTGCT TGGGTGTATC AAAGCGAAAA CAGCCAATTG CAAGTCCAAC AGCAGCAAGA ACTCGATAGC TTTAAATCTA GCTTAAGCCG CTACCAACAA TGGCAGGGTA ACGGTGTAGA ACTCTTTAAA AAACTTTCTG AAAACTACTC ATTCCAGTTC TTCCAATATA TTGATGATAC CGACGGCCAA CTGAGCTATA CCGAAGGAAG CTTAGACAGT AAACATCCAC ATCCTTTAGC GAGTTTATTT TCCATCGAAC TCAGCCACAC ACAAAAATTG GCATCGGGTC GTTTACAGGT CAAGCTCAGT GCAAACCAAG CCATTGATAC TGCAATTAGT AACACTCAAA AACTCGGTGT CATGTTGCTA GTGACTTACC TTATTCTGCT ATTAGTGTTT ATTCTATTAA TGTCGAAACT CAGAGCTGCG GTACGTTATG CTGCTGATTA TATTTCAAAA ATACCCGAGT TAGGCTTTTC TGCCGTCGCA GCTTCGAAAC TGACTGGAGA GCTCACCCCT ATTGGTATCT CCCTCGAAGA ATGTCGCCTG CAACTTAAAG CCCAAATCGA TAAGCTCAAT CAAGAAAATG AAAAACTGCA TAAAGCAGCC TATCAAGACG CCGTCACAGG TTTTGGTAGT CGCCAACGTT TCACCCAAAA ATTAGAAACC ATTAGTCATC CCGATATTCC TCAACTTGGG CTGATGGCAA TGGTTAAAGC GACTGAGCTG ACCCTCATTA ATCAAAAACA AGGCCGTTCA GCGGGTGATG ATTATCTTTC GAGTGTGGCT AATTGCATCC GCAAAGCCTG TAGCAAATAT GCAGATGCTG AATGTTTTAG GGTATCGAGT GCCGATTTTG CGGTGTTTAT TCCCGATGTC ATGCTAAAAG ATGCACCGAA ATTTTTAGAC CAATTAAAAA TTTACCTCGA TGAATATCAG CAGATGACCA GTGCAGAATC CGTCGCCCAT ATAGGCTTAG TCCCCTATCG CCAAGGTACC GAAGCGGTTA ATTTACTGAC AATTGCCGAT ACCGCGGTCA GCATAGCTCA GACCCTTGGC CCCAATAGCT ATCACATTCA AGAGAAACTC AATGGTGATG AGCAGTTTGG TGACGATCGT TGGAAGATGG CGATTCATGA TTTAGTGACT CGCCAAGCAC TGAAATTCTA CCAACAGCCT ATTCAGCCTT GTCGTACCGA TGTAGAAGTT TACCGTGAGT TGTTGGCGCG TTTTTACAAT AGCGAAGGTA AGTTCTTGCC CACCACCACT GTGATTGCCA TGGCTGAACG TCACGGTATG AGCTCAGAAT TAGATAAACT GGTCGTGATC AGTGCATTAA AGATACTTAA AGAAAACCCG ACTATTTCCG GTAACTTTGG TATCAATATC AGCGCATTTT CAGCCCATCA AGACATGTTT GTCGCTTGGC TAAAAGACAT ACTAGGTAAG CAAAAATACA TAGCCTCGCG CTTAGTATTT GAGATCAATG AGTCCGGCAT GCAATCTAAC TTAGGGGCGA GTTATAAATT TGTCCGCGAA GTGCACAGTG TTGGTTCACG TGTGTCGATT GAGCGTTTTG GCATGAGCTT TACCTCCTTC AAATTCTTCA GCGAAGTGCG CCCCGATTAC ATTAAGCTCG ATGGCAGCTA CACGTCTAAC ATAGATGAAG ACAGCAACAA TAAGTTCTTT GTACGTATGA TGGTGGATGT CGCCAGACGA ATTGGCATTC GGGTCATCGC AACCAGTGTC GAACGCCAAG AAGAAAAATT AACACTCGAA AAACTCTTAG TCGATGGATT GCAGGGCTAT TACATCGCAC AGCCCCAAGC CATGGCCATT ACAGATCAGA TTTAA
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Protein sequence | MAMSKSYPIF LLLIFLGLFA WVYQSENSQL QVQQQQELDS FKSSLSRYQQ WQGNGVELFK KLSENYSFQF FQYIDDTDGQ LSYTEGSLDS KHPHPLASLF SIELSHTQKL ASGRLQVKLS ANQAIDTAIS NTQKLGVMLL VTYLILLLVF ILLMSKLRAA VRYAADYISK IPELGFSAVA ASKLTGELTP IGISLEECRL QLKAQIDKLN QENEKLHKAA YQDAVTGFGS RQRFTQKLET ISHPDIPQLG LMAMVKATEL TLINQKQGRS AGDDYLSSVA NCIRKACSKY ADAECFRVSS ADFAVFIPDV MLKDAPKFLD QLKIYLDEYQ QMTSAESVAH IGLVPYRQGT EAVNLLTIAD TAVSIAQTLG PNSYHIQEKL NGDEQFGDDR WKMAIHDLVT RQALKFYQQP IQPCRTDVEV YRELLARFYN SEGKFLPTTT VIAMAERHGM SSELDKLVVI SALKILKENP TISGNFGINI SAFSAHQDMF VAWLKDILGK QKYIASRLVF EINESGMQSN LGASYKFVRE VHSVGSRVSI ERFGMSFTSF KFFSEVRPDY IKLDGSYTSN IDEDSNNKFF VRMMVDVARR IGIRVIATSV ERQEEKLTLE KLLVDGLQGY YIAQPQAMAI TDQI
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