Gene Sbal223_2272 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_2272 
Symbol 
ID7086399 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp2697568 
End bp2699472 
Gene Length1905 bp 
Protein Length634 aa 
Translation table11 
GC content43% 
IMG OID643461170 
Productdiguanylate cyclase/phosphodiesterase 
Protein accessionYP_002358194 
Protein GI217973443 
COG category[T] Signal transduction mechanisms 
COG ID[COG2200] FOG: EAL domain 
TIGRFAM ID[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000104677 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.665936 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCATGT CAAAATCATA TCCAATTTTT TTACTGCTTA TTTTCTTAGG TCTCTTTGCT 
TGGGTGTATC AAAGCGAAAA CAGCCAATTG CAAGTCCAAC AGCAGCAAGA ACTCGATAGC
TTTAAATCTA GCTTAAGCCG CTACCAACAA TGGCAGGGTA ACGGTGTAGA ACTCTTTAAA
AAACTTTCTG AAAACTACTC ATTCCAGTTC TTCCAATATA TTGATGATAC CGACGGCCAA
CTGAGCTATA CCGAAGGAAG CTTAGACAGT AAACATCCAC ATCCTTTAGC GAGTTTATTT
TCCATCGAAC TCAGCCACAC ACAAAAATTG GCATCGGGTC GTTTACAGGT CAAGCTCAGT
GCAAACCAAG CCATTGATAC TGCAATTAGT AACACTCAAA AACTCGGTGT CATGTTGCTA
GTGACTTACC TTATTCTGCT ATTAGTGTTT ATTCTATTAA TGTCGAAACT CAGAGCTGCG
GTACGTTATG CTGCTGATTA TATTTCAAAA ATACCCGAGT TAGGCTTTTC TGCCGTCGCA
GCTTCGAAAC TGACTGGAGA GCTCACCCCT ATTGGTATCT CCCTCGAAGA ATGTCGCCTG
CAACTTAAAG CCCAAATCGA TAAGCTCAAT CAAGAAAATG AAAAACTGCA TAAAGCAGCC
TATCAAGACG CCGTCACAGG TTTTGGTAGT CGCCAACGTT TCACCCAAAA ATTAGAAACC
ATTAGTCATC CCGATATTCC TCAACTTGGG CTGATGGCAA TGGTTAAAGC GACTGAGCTG
ACCCTCATTA ATCAAAAACA AGGCCGTTCA GCGGGTGATG ATTATCTTTC GAGTGTGGCT
AATTGCATCC GCAAAGCCTG TAGCAAATAT GCAGATGCTG AATGTTTTAG GGTATCGAGT
GCCGATTTTG CGGTGTTTAT TCCCGATGTC ATGCTAAAAG ATGCACCGAA ATTTTTAGAC
CAATTAAAAA TTTACCTCGA TGAATATCAG CAGATGACCA GTGCAGAATC CGTCGCCCAT
ATAGGCTTAG TCCCCTATCG CCAAGGTACC GAAGCGGTTA ATTTACTGAC AATTGCCGAT
ACCGCGGTCA GCATAGCTCA GACCCTTGGC CCCAATAGCT ATCACATTCA AGAGAAACTC
AATGGTGATG AGCAGTTTGG TGACGATCGT TGGAAGATGG CGATTCATGA TTTAGTGACT
CGCCAAGCAC TGAAATTCTA CCAACAGCCT ATTCAGCCTT GTCGTACCGA TGTAGAAGTT
TACCGTGAGT TGTTGGCGCG TTTTTACAAT AGCGAAGGTA AGTTCTTGCC CACCACCACT
GTGATTGCCA TGGCTGAACG TCACGGTATG AGCTCAGAAT TAGATAAACT GGTCGTGATC
AGTGCATTAA AGATACTTAA AGAAAACCCG ACTATTTCCG GTAACTTTGG TATCAATATC
AGCGCATTTT CAGCCCATCA AGACATGTTT GTCGCTTGGC TAAAAGACAT ACTAGGTAAG
CAAAAATACA TAGCCTCGCG CTTAGTATTT GAGATCAATG AGTCCGGCAT GCAATCTAAC
TTAGGGGCGA GTTATAAATT TGTCCGCGAA GTGCACAGTG TTGGTTCACG TGTGTCGATT
GAGCGTTTTG GCATGAGCTT TACCTCCTTC AAATTCTTCA GCGAAGTGCG CCCCGATTAC
ATTAAGCTCG ATGGCAGCTA CACGTCTAAC ATAGATGAAG ACAGCAACAA TAAGTTCTTT
GTACGTATGA TGGTGGATGT CGCCAGACGA ATTGGCATTC GGGTCATCGC AACCAGTGTC
GAACGCCAAG AAGAAAAATT AACACTCGAA AAACTCTTAG TCGATGGATT GCAGGGCTAT
TACATCGCAC AGCCCCAAGC CATGGCCATT ACAGATCAGA TTTAA
 
Protein sequence
MAMSKSYPIF LLLIFLGLFA WVYQSENSQL QVQQQQELDS FKSSLSRYQQ WQGNGVELFK 
KLSENYSFQF FQYIDDTDGQ LSYTEGSLDS KHPHPLASLF SIELSHTQKL ASGRLQVKLS
ANQAIDTAIS NTQKLGVMLL VTYLILLLVF ILLMSKLRAA VRYAADYISK IPELGFSAVA
ASKLTGELTP IGISLEECRL QLKAQIDKLN QENEKLHKAA YQDAVTGFGS RQRFTQKLET
ISHPDIPQLG LMAMVKATEL TLINQKQGRS AGDDYLSSVA NCIRKACSKY ADAECFRVSS
ADFAVFIPDV MLKDAPKFLD QLKIYLDEYQ QMTSAESVAH IGLVPYRQGT EAVNLLTIAD
TAVSIAQTLG PNSYHIQEKL NGDEQFGDDR WKMAIHDLVT RQALKFYQQP IQPCRTDVEV
YRELLARFYN SEGKFLPTTT VIAMAERHGM SSELDKLVVI SALKILKENP TISGNFGINI
SAFSAHQDMF VAWLKDILGK QKYIASRLVF EINESGMQSN LGASYKFVRE VHSVGSRVSI
ERFGMSFTSF KFFSEVRPDY IKLDGSYTSN IDEDSNNKFF VRMMVDVARR IGIRVIATSV
ERQEEKLTLE KLLVDGLQGY YIAQPQAMAI TDQI