Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_2185 |
Symbol | |
ID | 7085991 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | + |
Start bp | 2600827 |
End bp | 2601369 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 643461084 |
Product | translation initiation factor IF-3 |
Protein accession | YP_002358108 |
Protein GI | 217973357 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0290] Translation initiation factor 3 (IF-3) |
TIGRFAM ID | [TIGR00168] translation initiation factor IF-3 |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0000180897 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.0386823 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATAAAGATCA AAAAAACAGC AGGGCGTCAG CCGGCCCCTA ATAGAATCAA TGAAGAAATC ACAGGTGTAC CTGAAGTACG CTTAACTGGC ATTGATGGTG AAGCTATTGG TGTGGTAAGC ATCAGAGATG CTCAGAATTT GGCAGATGAA GCAGGTGTAG ACCTGGTAGA AATCAGCCCA AATGCTGAAC CTCCAGTATG TCGCATTATG GACTACGGTA AGTTCCTTTT TGATAAGGCT AAGTCAGCCA AGGAACAAAA GAAGAAGCAA AAGCAGGTTC AGGTCAAGGA AATTAAATTC CGTCCTGGAA CTGACGAAAA CGACTATCAG GTAAAACTAC GCAACCTGAT ACGTTTTCTG GAAGACGGGG ACAAAGCGAA GATTACGCTA CGTTTCCGAG GTCGCGAAAT GGCACACCAA AACCTGGGTA TGGATCTATT GAACCGTATC AAGGCTGATT TGGACGAGTA TGCGGTTGTT GAATCTTTCC CGAAAATGGA AGGCCGACAA GCAATTATGG TGCTAGCGCC TAAAAAGAAA TAA
|
Protein sequence | MKIKKTAGRQ PAPNRINEEI TGVPEVRLTG IDGEAIGVVS IRDAQNLADE AGVDLVEISP NAEPPVCRIM DYGKFLFDKA KSAKEQKKKQ KQVQVKEIKF RPGTDENDYQ VKLRNLIRFL EDGDKAKITL RFRGREMAHQ NLGMDLLNRI KADLDEYAVV ESFPKMEGRQ AIMVLAPKKK
|
| |