Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_2174 |
Symbol | |
ID | 7085980 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | + |
Start bp | 2590790 |
End bp | 2591575 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 643461074 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_002358098 |
Protein GI | 217973347 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.30567 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.00567391 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATAACAACTT CTACAGTCCT TATCACAGGC GCTTCTACTG GAATTGGCGC TATCTATGCT GATCGCTTTG CGCGTCGTGG TCACGATCTC GTCATCGTTG CCCGCGATGG TGCAAAACTT GAGGCTCTGG CAACTCGCTT GCGTCAAGAA TATCGCGTGA ATGTCGATGT GCTGCCTGCT GATCTCACCA AATCTAGCGA CCTTGCGATC GTTGAAAAAC GTCTGCAAGA CGATGCGCGT ATCGACACTC TGGTTAACAA CGCGGGTATC GCGCAATCAG GTAGCTTTGT TGAACAAACT CCCGACTTAA TTGAAAAACT GATCGCACTT AACATCACTG CGCTAACCAG ACTTGCCAAT GCAGTAACGC CACGTTTAGT CCAGCAAGGC AAAGGCGCTA TCGTCAATGT GTCTTCGGTT GTTGGCCTAG CGCCTGAATA CCAAATGTCT GTCTACGGTG CCAGCAAGGC ATTCGTCTTG TTCTTATCTC AAGGCATGCA CCAAGAATTG TCACCTAAAG GTATTTACGT TCAAGCGCTT CTGCCAGCAG GCACTTATAC CGAAATCTGG GACCGAGCGG GAATCGATAT CAGTAACTCC TCACCTATGA TGGAAGTCAA TGAGCTCGTC GATGCGGCGT TGGTAGGCTT CGATTGCAAA GAACTGGTCA CCATTCCACC ATTGCATAAA GAGACACGTT GGGATGATTT AGAAAAGGCG CGACAAGGAT TGCTGTCCGA CATCGAGATG TCACAAGCAG CAGCGCGTTA TAAAACAGCT AAATAA
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Protein sequence | MTTSTVLITG ASTGIGAIYA DRFARRGHDL VIVARDGAKL EALATRLRQE YRVNVDVLPA DLTKSSDLAI VEKRLQDDAR IDTLVNNAGI AQSGSFVEQT PDLIEKLIAL NITALTRLAN AVTPRLVQQG KGAIVNVSSV VGLAPEYQMS VYGASKAFVL FLSQGMHQEL SPKGIYVQAL LPAGTYTEIW DRAGIDISNS SPMMEVNELV DAALVGFDCK ELVTIPPLHK ETRWDDLEKA RQGLLSDIEM SQAAARYKTA K
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