Gene Sbal223_2174 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_2174 
Symbol 
ID7085980 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp2590790 
End bp2591575 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content49% 
IMG OID643461074 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_002358098 
Protein GI217973347 
COG category[R] General function prediction only 
COG ID[COG0300] Short-chain dehydrogenases of various substrate specificities 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.30567 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.00567391 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATAACAACTT CTACAGTCCT TATCACAGGC GCTTCTACTG GAATTGGCGC TATCTATGCT 
GATCGCTTTG CGCGTCGTGG TCACGATCTC GTCATCGTTG CCCGCGATGG TGCAAAACTT
GAGGCTCTGG CAACTCGCTT GCGTCAAGAA TATCGCGTGA ATGTCGATGT GCTGCCTGCT
GATCTCACCA AATCTAGCGA CCTTGCGATC GTTGAAAAAC GTCTGCAAGA CGATGCGCGT
ATCGACACTC TGGTTAACAA CGCGGGTATC GCGCAATCAG GTAGCTTTGT TGAACAAACT
CCCGACTTAA TTGAAAAACT GATCGCACTT AACATCACTG CGCTAACCAG ACTTGCCAAT
GCAGTAACGC CACGTTTAGT CCAGCAAGGC AAAGGCGCTA TCGTCAATGT GTCTTCGGTT
GTTGGCCTAG CGCCTGAATA CCAAATGTCT GTCTACGGTG CCAGCAAGGC ATTCGTCTTG
TTCTTATCTC AAGGCATGCA CCAAGAATTG TCACCTAAAG GTATTTACGT TCAAGCGCTT
CTGCCAGCAG GCACTTATAC CGAAATCTGG GACCGAGCGG GAATCGATAT CAGTAACTCC
TCACCTATGA TGGAAGTCAA TGAGCTCGTC GATGCGGCGT TGGTAGGCTT CGATTGCAAA
GAACTGGTCA CCATTCCACC ATTGCATAAA GAGACACGTT GGGATGATTT AGAAAAGGCG
CGACAAGGAT TGCTGTCCGA CATCGAGATG TCACAAGCAG CAGCGCGTTA TAAAACAGCT
AAATAA
 
Protein sequence
MTTSTVLITG ASTGIGAIYA DRFARRGHDL VIVARDGAKL EALATRLRQE YRVNVDVLPA 
DLTKSSDLAI VEKRLQDDAR IDTLVNNAGI AQSGSFVEQT PDLIEKLIAL NITALTRLAN
AVTPRLVQQG KGAIVNVSSV VGLAPEYQMS VYGASKAFVL FLSQGMHQEL SPKGIYVQAL
LPAGTYTEIW DRAGIDISNS SPMMEVNELV DAALVGFDCK ELVTIPPLHK ETRWDDLEKA
RQGLLSDIEM SQAAARYKTA K