Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_2162 |
Symbol | |
ID | 7085968 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | + |
Start bp | 2574877 |
End bp | 2575869 |
Gene Length | 993 bp |
Protein Length | 330 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 643461063 |
Product | SMP-30/Gluconolaconase/LRE domain protein |
Protein accession | YP_002358087 |
Protein GI | 217973336 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3386] Gluconolactonase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.15283 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.000142623 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAACAATA TTGTTGGTGT TGACAAATTA CTGATGACCA TTCCCGTAGG TAATATTCTA GGGGAAGGTG TGCTTTGGGA TGATAAAACC CAATCCATTT GGTGGACTGA TATTGAAGCT GCTGAGATAC TCAATTACTC AATTACGACT CAAAGTCTTC GAACTATTGC CATGCCGTAT CGAGTCGGTT CATTTGGTTT AACGCAAAAT GCAGAACAAC TGATAGTCGC GTTTGACCGT GGTATAGCGT TATACCATTT AAAAAATAAT GAAGTACAAT GGCTTGCTAC GCCAGAATCA CACCTTACGA ATAATAGATT TAATGACGGC AGAGTAGACA GGCAAGGGCG CTTCTGGGCT GGTACTATGG TTGAAACTAT GGTTGAAACT GTGGTTGAAA CTGTGGTCGA AAATGGTCCT TATCCAAGCA GTGATGCAGC ACTTTACTGC ATAGATCATC AAGGCCAATG TTTAAAAGTA TGTGAGAACA TCAGCATTTC AAATGGGCTC TGCTGGAGTC CTGATGGACT GACTATGTAC CATGCCGACT CACCAAAACA TGAAATTTTT CAATATGACT TTGATCCAAA CACAGCATCA GTCAGCAATA AGCGTTCATT TGTCACAACA GAGAAAATGA TTTTCCCTGA TGGTTCTGAA GTCGATGCCG CTGGATATAT TTGGAACGCT CAATGGGGTG GCGGTCAAGT GGTTCGTTAT CGTCCCAACG GCCAAGTCGA TCTTACACTG ACATTACCCG TTACTAATCC AACCAGTATC TCCATAGGTG GGCCAAACAT GGACTGGCTT ATCATCACCA GCGCAAAACA TTCATTAAGT GCTGAACAAT TATCAAAAGA GTCCCAGGCA GGTGATGTAT TTATTTATCC GTTAGTCGGC ATAAAGGGAC TGAACAGTCC ATTAGCGAAA TTTACAAAAA TAATGAGCAA TTATCAGTCC CTAAACACAT TTAGCCACTT CCTAGGTGAA TAG
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Protein sequence | MNNIVGVDKL LMTIPVGNIL GEGVLWDDKT QSIWWTDIEA AEILNYSITT QSLRTIAMPY RVGSFGLTQN AEQLIVAFDR GIALYHLKNN EVQWLATPES HLTNNRFNDG RVDRQGRFWA GTMVETMVET VVETVVENGP YPSSDAALYC IDHQGQCLKV CENISISNGL CWSPDGLTMY HADSPKHEIF QYDFDPNTAS VSNKRSFVTT EKMIFPDGSE VDAAGYIWNA QWGGGQVVRY RPNGQVDLTL TLPVTNPTSI SIGGPNMDWL IITSAKHSLS AEQLSKESQA GDVFIYPLVG IKGLNSPLAK FTKIMSNYQS LNTFSHFLGE
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