| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_2082 |
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| Symbol | |
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| ID | 7088375 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011663 |
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| Strand | - |
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| Start bp | 2466396 |
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| End bp | 2467511 |
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| Gene Length | 1116 bp |
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| Protein Length | 371 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 643460985 |
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| Product | integrase family protein |
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| Protein accession | YP_002358009 |
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| Protein GI | 217973258 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.024543 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.000210845 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCTAAAA TGATCCGGAC AAATAGTAAT GCTCAAAATA ACACCAATAT ATCGAATGAA
AGAGTGATAG GATCAGGTCA TCACCATAAT AACCGTGCTG AACAGCCACG TTTTTTTGAA
GAGTCTTTCC TACCACAATC TGTTCGAAGT GATTATTTAA GCGCCGCCGA AGAAACTGAA
TACGAAATTT CAGTGAACAC TCGCCGTGTT TATAATACGA GCTTTAGTGT ATTTAGCCGT
TATTGTGCCG AGCACCAACT TCAGGCCCTG CCCGCAGATC CACGAAGCGT CATTTCATTT
ATTGGTCATC AAAAAGAATT GATCCAAGAA AGCACTGGCG TTCAACTTTC AAAGCAAACA
TTAACCACAA GGTTGGCAGC AATTCGCTAC CATCATATTC AAGCGGGATT TCACTCGCCC
ACCGAACATC CACTGGTGAT CAGAGTGATG CGTGGCTTGA GCAGAAATCA ATCTCGCCAT
GTGAGTGACT ATGATCAACA ACCCATTATG TATGATGAAG TGGAAATGTT GATCCAGGCT
ATCGATGAAC AAGTGCAGCC ATTAACCCGA GCGCGGGACA AAGCGATTAT TCAATTAGGA
TTACAAGGTG GGTTTCGTCG TTCTGAACTG GCAGATATAA AAGTTCAGTA TGTCAGTTTT
CTGCGTAACA AATTAAAAGT GCGCCTGCCC TATTCGAAGA GTAATCAGCA AGGCCAACGG
GAATGGAAAG ACCTGCCAGA CCATGAACCC TTTGCGGCAC TTGATGCCGT GAAAAATTGG
TTATCGTTAG CCAATATTGA AGACGGACAT TTATTTAGAT CGCTTTCCCG TGATGGAAAA
AAATTACGTC CGTATCAAAT GAAAAACCGA CATTCAGGTT CTAATTCATT ACTGAATAAG
AATAGTGGTT TCCTTACTGG CGATGATATT TATCGCATCA TTAAAAAATA TTGTACTAAA
GCAGGACTGC CCGCTAAATT TTATGGTGCC CACAGTTTGC GCAGTGGCTG CGTAACACAA
CTGCATGAAA ATAATAAAGA TCACTTGTAC ATCATGGCCA GAACCGGACA TACCGATCCG
CGCTCACTTC GTCACTATTT AAAACCAAAA GACTGA
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| Protein sequence | MSKMIRTNSN AQNNTNISNE RVIGSGHHHN NRAEQPRFFE ESFLPQSVRS DYLSAAEETE
YEISVNTRRV YNTSFSVFSR YCAEHQLQAL PADPRSVISF IGHQKELIQE STGVQLSKQT
LTTRLAAIRY HHIQAGFHSP TEHPLVIRVM RGLSRNQSRH VSDYDQQPIM YDEVEMLIQA
IDEQVQPLTR ARDKAIIQLG LQGGFRRSEL ADIKVQYVSF LRNKLKVRLP YSKSNQQGQR
EWKDLPDHEP FAALDAVKNW LSLANIEDGH LFRSLSRDGK KLRPYQMKNR HSGSNSLLNK
NSGFLTGDDI YRIIKKYCTK AGLPAKFYGA HSLRSGCVTQ LHENNKDHLY IMARTGHTDP
RSLRHYLKPK D
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