| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_2052 |
|---|
| Symbol | |
|---|
| ID | 7088345 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | + |
|---|
| Start bp | 2427056 |
|---|
| End bp | 2429074 |
|---|
| Gene Length | 2019 bp |
|---|
| Protein Length | 672 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 643460955 |
|---|
| Product | NADH:flavin oxidoreductase/NADH oxidase |
|---|
| Protein accession | YP_002357979 |
|---|
| Protein GI | 217973228 |
|---|
| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases
[COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.120429 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 1 |
|---|
| Fosmid unclonability p-value | 0.000000000116083 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTCGTTTC CCCATTTATT AGAACCCTTA GATCTGGGAT TTACCCAGCT CAAAAACCGC
GTGCTTATGG GCTCAATGCA CACAGGTTTG GAAGAAGAAA AGGGCGGATT TGAGAAACTG
GCAGCGTTCT ACAAAGAACG CGCTCTGGGC GGTGTGGGTT TGATTGTGAC GGGCGGTATT
TCCCCTAATC TTCGCGGCCG CCTTACGCCC CACGCCTGTC AGCTGAGTTT TCCTTGGCAA
GTCGGTAAGC ATCGCGTGGT CACGCAGGCG GTGCATGAGG CTGGCGGTAA GATCTGTATG
CAAATTTTGC ATGCGGGCCG CTATGGTTAT CATCCTTTTT CCCAAGCACC GAGCAAGATT
AAATCACCCA TTACACCTTT TACGCCGTCT GCTATGTCTA GTCGCCAAGT GCGCTCGACC
ATTAAGGATT ACGCCAGCTC AGCCGCCCTT GCCAAGAAAG CCGGTTACGA TGGCGTTGAG
GTCATGGGAT CTGAAGGCTA TTTGATCAAT CAGTTTGTCA GTGCGCGTAC CAACACCCGC
ACCGATGAAT GGGGCGGTGC GTTTGAAAAG CGGGCGCAAT TCCCTATTGA GATTGTTAAC
GCGATACGGG CAAAGGTCGG AAAAGACTTC ATCATTATCT TCCGTTTATC TATGCTCGAT
CTAGTGGATA ACGGCTCGAC TTGGGATGAA GTAGTGCAAC TCGCCCAGTG GTTAGAGCAA
GCTGGCGTGT CCATTTTGAA TACCGGCATT GGTTGGCATG AAGCTCGCGT ACCGACCATT
GCGACAAGTG TGCCCCGCGG CGCCTTTGCG TGGGTGACTG AAAAGCTCAA ACAATCAGTT
TCTGTGCCCT TAATTGCGAC TAACCGCATT AACACCCCTG AGATTGGCGA GCAGATCATT
GCCTCAGGTC AAGCTGACAT GGTGTCGATG GCAAGGCCTT TCCTTGCTGA TCCTGAGTTT
GTGAATAAAG CCGCAGCGAA CACGCCAGAG CTTATCAACA CCTGCATTGG CTGTAACCAA
GCGTGTCTTG ATCATACTTT CTCCCTTAAG CGCGCGACCT GCTTAGTGAA TCCTCGTGCC
TGTTATGAGA CTGAAATCAA CTTCTTACCC ACAGCAAATA AAAAGCGTAT TGCGGTGATG
GGCGCAGGTC CTGCGGGCAT GGCGTTCTCT GTCTATGCCG CCATGCGTGG CCATCACGTT
GTCTTGTTTG AAGCGAAATC CGAGGTGGGA GGTCAGTTTA ATCTCGCCCG TAAAATTCCC
GGAAAAGAAG AGTTTAACGA GACTATCCGT TATTTCATCA ACCAAATTAA GCTGCATAAG
GTGGAGCTGA GATTAAACAC TCGCCTCGAT GCCAGCGTGT TGGCAACCGA AAAGTTTGAT
GAAGTGGTGA TAGCGTCAGG CGTTGTGCCG CGTGATTTAG TCTTACCCGG CTTTGACGAC
CCACGCGTGG TCGATTATCA AAAAGTGCTC TCGGGTGAAG TGACTGTCGG TAATACGGTG
GCTTTGATTG GTGCTGGCGG CATAGGGTTC GATATGGCGC ATTACTTATG TGAGCGCCAA
TCTAGCACGC TGAACGCCGA TAAATGGCTA CAACAGTGGG GCATAGATAA AACTTATCAA
CATGCGGGCG GCCTGACAGA ACCTCAATCC GACAATACCG ATCATCGTAA GGTGTTTTTA
CTGCAACGTA AAACGTCGAA GATGGGCAAA GGCTTAGGTA AAACCACTGG CTGGATCCAC
CGTCTTGTGC TTAAGCAACA TGATGTGAAG ATGAAAACGG GCGTGAGTTA CGATAAGTTT
GATGATGCGG GACTGCATAT TCGCGTGGGC GAAACCGCTG AAGTACTGGC CGTTGATAAT
GTTGTGCTTT GCGCTGGACA AGAATCGAAT CGCACCTTAG TGGATGAGAT GAAAGCGACG
GGCTTGCCTG TGCATCTGAT TGGCGGCGTG GATGTCGCGG CTGAGCTTGA TGCTAAGCGT
GCCATCCGCC AAGGCGCTGA GCTGGCAATG CACTTATAG
|
|---|
| Protein sequence | MSFPHLLEPL DLGFTQLKNR VLMGSMHTGL EEEKGGFEKL AAFYKERALG GVGLIVTGGI
SPNLRGRLTP HACQLSFPWQ VGKHRVVTQA VHEAGGKICM QILHAGRYGY HPFSQAPSKI
KSPITPFTPS AMSSRQVRST IKDYASSAAL AKKAGYDGVE VMGSEGYLIN QFVSARTNTR
TDEWGGAFEK RAQFPIEIVN AIRAKVGKDF IIIFRLSMLD LVDNGSTWDE VVQLAQWLEQ
AGVSILNTGI GWHEARVPTI ATSVPRGAFA WVTEKLKQSV SVPLIATNRI NTPEIGEQII
ASGQADMVSM ARPFLADPEF VNKAAANTPE LINTCIGCNQ ACLDHTFSLK RATCLVNPRA
CYETEINFLP TANKKRIAVM GAGPAGMAFS VYAAMRGHHV VLFEAKSEVG GQFNLARKIP
GKEEFNETIR YFINQIKLHK VELRLNTRLD ASVLATEKFD EVVIASGVVP RDLVLPGFDD
PRVVDYQKVL SGEVTVGNTV ALIGAGGIGF DMAHYLCERQ SSTLNADKWL QQWGIDKTYQ
HAGGLTEPQS DNTDHRKVFL LQRKTSKMGK GLGKTTGWIH RLVLKQHDVK MKTGVSYDKF
DDAGLHIRVG ETAEVLAVDN VVLCAGQESN RTLVDEMKAT GLPVHLIGGV DVAAELDAKR
AIRQGAELAM HL
|
|---|
| |