Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_1955 |
Symbol | |
ID | 7090122 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | + |
Start bp | 2315735 |
End bp | 2316430 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 643460858 |
Product | lipoprotein releasing system, ATP-binding protein |
Protein accession | YP_002357882 |
Protein GI | 217973131 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | [TIGR02211] lipoprotein releasing system, ATP-binding protein |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00212141 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.0513198 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAGACG TGTTACTGCA AGTGCAGAGT GTCAGTAAGA GTTACCATGA TGGCGCCGTG ACCACGCAAG TGTTGTCTAA TGTTGATCTG CAAGTGTTTA AGGGCGAGCA GTTGGCGATT GTCGGCAGTT CAGGCTCAGG TAAGAGTACC TTGCTGCACA TCATGGGCAC GTTGGATGAA CCAACCGCAG GTAAAGTCTT GCTGTTAGGC GAAGATTTAT ATCAAGTGTC CAGTGCGCGC CAAGCGCAGA TCCGTAACCA AGACTTAGGT TTTATCTATC AATTCCATCA TTTATTGCCT GAATTTACCG CGCTAGAAAA CGTCGCTATG CCAGCGTTTA TTCAAGGTAA AGATCGTAAG CTGGCGCTCG CCGATGCTAA AGCCTTGTTG GAGCGGGTCG GGTTAGGGCA TCGCATGACG CACATTCCCG CCGAGTTATC GGGCGGCGAA CGTCAGCGTG TGGCTATCGC AAGGGCCTTG ATTAATAAAC CTAAATTAGT GCTGGCCGAT GAACCTACGG GCAACTTAGA TGCCAACAGC GGCGATGCCG TTTATGAGTT GATCCGCGAA CTCGCCGAAC AACTGGGTAC GGCGTTTGTG GTGGTGACCC ATGATCATAA ATTGGCCGCC CGTATGGACC GACAACTGAT GATGAAGAAC GGCTTCCTGC AATTAGCGGC GGAAACCCAA GTATGA
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Protein sequence | MQDVLLQVQS VSKSYHDGAV TTQVLSNVDL QVFKGEQLAI VGSSGSGKST LLHIMGTLDE PTAGKVLLLG EDLYQVSSAR QAQIRNQDLG FIYQFHHLLP EFTALENVAM PAFIQGKDRK LALADAKALL ERVGLGHRMT HIPAELSGGE RQRVAIARAL INKPKLVLAD EPTGNLDANS GDAVYELIRE LAEQLGTAFV VVTHDHKLAA RMDRQLMMKN GFLQLAAETQ V
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