Gene Sbal223_1939 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_1939 
Symbol 
ID7090106 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp2293952 
End bp2294830 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content50% 
IMG OID643460843 
Producttranscriptional regulator, LysR family 
Protein accessionYP_002357867 
Protein GI217973116 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.775483 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACCTCT GGGATGGCAT TTCTGAATTT GTCGCAGTGG CCGAAGCCGA AAGTTTTACC 
TTAGCGGCGC AGCGACTGAA TATCTCCACC GCCCACGTGA GCCGCCAAGT CAGCGCCTTA
GAGAATCGCC TCGGCACTAA GCTGTTTTAC CGCACCACCC GCAAAGTGTC GCTAACCGAA
GAAGGCACCA TTTATTATCG TCATTGCCGC CAATTACAAA CGGGGTTAGA AGAAGCCGAG
CGCGCCATCT CAAACCTAAA GGACTCACCC CAAGGCTTAG TCAAACTCAC GGCGCCCGTG
GCCTATGGCG AGAAATTTAT CATGCCGTTA CTTAATGATT TTATGGTGCA ATATCCCAGC
GTTGAATTTA GTGTCGACTT GACCAATCGC ACCTTAGACT TGATTGAAGG TGGTTACGAT
CTGGCCATTC GCCTCGGCAA ACTCGCCGAC TCGAGTTTAA TGGCCAAACC CTTAAGCAGC
CGTACTCACT ATGTGGCCGC CTCACCGAGT TATGTGGAAA AATACGGCCA GCCCCATACG
CTATCAGAGC TTAACCAGCA CAATTGCTTG ATTGGTAATC ACAATTACTG GCGCTTTGTG
GAGAATGGCC GCGAACGCAA TATCAAAGTG CGCGGCAATC TCAATTGTAA CAGCGGCTAC
GCATTAAGGG ATGCGGCGCT AAAGGGAATT GGTATAGTAC AACTACCTGA TTATTATATT
GAAGATGATA TAAATGCAGG ACGTTTACTG TCCTTACTCG ACGGTCACCG CGAAGCCAAA
GAAGGCATTT GGGCACTCTA TCCGCAAAAC CGCCACCTGT CGGCCAAGAT CCGCGTATTA
GTCGATTACC TCGCCGAAAA ACTCATCGAA CAGGACTAA
 
Protein sequence
MYLWDGISEF VAVAEAESFT LAAQRLNIST AHVSRQVSAL ENRLGTKLFY RTTRKVSLTE 
EGTIYYRHCR QLQTGLEEAE RAISNLKDSP QGLVKLTAPV AYGEKFIMPL LNDFMVQYPS
VEFSVDLTNR TLDLIEGGYD LAIRLGKLAD SSLMAKPLSS RTHYVAASPS YVEKYGQPHT
LSELNQHNCL IGNHNYWRFV ENGRERNIKV RGNLNCNSGY ALRDAALKGI GIVQLPDYYI
EDDINAGRLL SLLDGHREAK EGIWALYPQN RHLSAKIRVL VDYLAEKLIE QD