Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_1934 |
Symbol | |
ID | 7090101 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | + |
Start bp | 2286304 |
End bp | 2288226 |
Gene Length | 1923 bp |
Protein Length | 640 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 643460838 |
Product | helicase c2 |
Protein accession | YP_002357862 |
Protein GI | 217973111 |
COG category | [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG1199] Rad3-related DNA helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.101214 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.540234 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAGAC TTGCGGGCGA AGTGCAACGC GCATTTTTGC CCGATGGAGT ATTGTCTAAA CATATTCAAG GGTTTAGTGC GCGAACAAGC CAAATGCAAA TGGCGCAGCA AGTGAGTGAG GCGATAGCGT CTAAGAGTAA TGTGGTGATT GAGGCGGGCA CAGGGGTGGG TAAAACCTTT GCATATTTGA TCCCCGCGAT ATTGAGCGGC AAGCAAGTTA TCGTCAGTAC GGGCAGTAAA AATCTGCAAG AGCAGTTGTT TTTTAAAGAC TTACCCGCAC TGGTCGCCAT GTTGGGGATT GAGCCCAAAC TGGCGCTGCT TAAGGGGCGC AATAATTATC TGTGCCAGTG GCGACTCGAT AAGCAAATGA GCGAGGCGAC ACATATCGAT GCGCGTTTAT TAGATGATTT GTTGAAAATC AATCAGTGGG CGAGCACTTG TAAAGATGGT GATATTGGCG GTTTAACCTC AGTGCCTGAG AATTCCTCGG CGCTGCCGCT CGTGGTCAGT ACTAAAGAAA GCTGTATTGG TAAGCGCTGC GATTTTTACG ATGCCTGCTT TACCCGTAAG GCGCGCAGCC GTGCTATGGA TGCCAAAATA ATCGTGGTTA ACCACCATTT ATTTTTCGCC GATAGCGTAC TAAAAGACAC GGGCTTTGCC GAGTTATTAC CCGATCCTGA TGTGGTTATT TTCGATGAAG CGCATTTATT ACCCGATATT TGCGTTAACT ATTTTGGCCA GCAATGTTCG AGTCGTACTA TCGATGATTT CATTCAAAAG CTACTCGCTA TTTATCAGAC CGAACTCAGT GATACTGGGC AACTCGCCCA TTTTTGCCAG CGTTGCCTCG CTAAATTAAG TGACTGGCAT AATCAGTTAT ATTCCTGCGG TGAATCCGAC TGGCGTTTAG TGCTGGGCAA TAAAGCGCTC GCGGCGGCGT CGTGGGATTT ATTAGCGGAA TTAACTGCGC TGCAGAATTT ATTAATGGCC CATATTGGCC GCAGTGAATT GTTAGATGAT ATCGCCATCA AGTTGGCGGA GCTGAATAAT AAGCTCAGCG TGTTTTTTAA CTGCGATAAT AATCTGGCGG CCTACAGCAT TGAATTTGGT AGTCGTTTTG TGGTGCTACG AATTTCACCC ATCAATATTG CCCGTGAGTG CCAGCAGTTA TTTGTGCCGG AAACCAGCTG GATATTTACC TCGGCAACTT TGCAGGTTAA TCGCAGCCTT ACCCATTTCG CCCGAGAAAT GGGTATCGTC GATGCGCAGC AAAGCATTCT CGACAGTCCC TTCGATTATC CCCGCCAAGC GGTATTTTGT GTGCCGAGAC AACTCGGCAG CGTGACCAAT CAACAGCAAG CGTTAAAGCA GCTGGTGGAG GTGTGCGTGC AGGCGATAGA TGCGGCACAG GGACGGACTT TTATTTTATT TACCAGCCAT AAAATGCTCG AACAAGCGGC GCTGGCACTG CGAACTCGCA CTCATTATCC GCTGCTGGTA CAAGGTCAAG CGGGTAAACA GAGTCTTCTG ACGAAGTTTC GCCAACTCGG CAATGCGGTA TTGCTCGGCA CCAGTAGTTT TTGGGAAGGG GTGGATGTGC GCGGTAAATT GTTAAGCTGC GTGATTATCG ACAAATTACC TTTTGTGTCG CCCGATGAGC CCCTGTATCG CGCCCGAGCT GATAATGTGA GTCGTCAGGG ACTCGATCCT TTTACTGAAG TGTCCTTACC TCAGGCGATT ATTGCGCTGA AACAAGGTGT TGGCCGTCTT ATTCGTGATG AAAAAGATCG CGGTGTGCTG ATCCTTTGTG ATAACCGCAT CGTGAATCGC TATTACGGCC AAGCCTTTTT AAACTCACTG CCGCCAATGG CGCGCACCCG TGACCTAGAT AAAGCGCTGG AATTTTTAAG GCAGATCCCT TGA
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Protein sequence | MSRLAGEVQR AFLPDGVLSK HIQGFSARTS QMQMAQQVSE AIASKSNVVI EAGTGVGKTF AYLIPAILSG KQVIVSTGSK NLQEQLFFKD LPALVAMLGI EPKLALLKGR NNYLCQWRLD KQMSEATHID ARLLDDLLKI NQWASTCKDG DIGGLTSVPE NSSALPLVVS TKESCIGKRC DFYDACFTRK ARSRAMDAKI IVVNHHLFFA DSVLKDTGFA ELLPDPDVVI FDEAHLLPDI CVNYFGQQCS SRTIDDFIQK LLAIYQTELS DTGQLAHFCQ RCLAKLSDWH NQLYSCGESD WRLVLGNKAL AAASWDLLAE LTALQNLLMA HIGRSELLDD IAIKLAELNN KLSVFFNCDN NLAAYSIEFG SRFVVLRISP INIARECQQL FVPETSWIFT SATLQVNRSL THFAREMGIV DAQQSILDSP FDYPRQAVFC VPRQLGSVTN QQQALKQLVE VCVQAIDAAQ GRTFILFTSH KMLEQAALAL RTRTHYPLLV QGQAGKQSLL TKFRQLGNAV LLGTSSFWEG VDVRGKLLSC VIIDKLPFVS PDEPLYRARA DNVSRQGLDP FTEVSLPQAI IALKQGVGRL IRDEKDRGVL ILCDNRIVNR YYGQAFLNSL PPMARTRDLD KALEFLRQIP
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